RNA–Protein interactions for RNA: ENST00000543082.5

TCF4-208, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,399 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-208ENST00000543082 NACA2Q9H009 215 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 SLC38A10Q9HBR0 1119 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 MRM3Q9HC36 420 aaKnown RBP9.8□□□□□ -0.84
TCF4-208ENST00000543082 GMIPQ9P107 970 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 ACTR3BQ9P1U1 418 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 XPR1Q9UBH6 696 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 VANGL2Q9ULK5 521 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 ATP11BQ9Y2G3 1177 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 IFT52Q9Y366 437 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 RBMX2Q9Y388 322 aaKnown RBP9.8□□□□□ -0.84
TCF4-208ENST00000543082 PARP14Q460N5 1801 aa9.8□□□□□ -0.84
TCF4-208ENST00000543082 ZFC3H1O60293 1989 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 COL11A2P13942 1736 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 TPST1O60507 370 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 KCNH1O95259 989 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 NR3C2P08235 984 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 MYL3P08590 195 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 HDCP19113 662 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 POLR2IP36954 125 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 PTPN9P43378 593 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 YAP1P46937 504 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 GLRBP48167 497 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 LEPRP48357 1165 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 SLC6A3Q01959 620 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 LDLRAP1Q5SW96 308 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 GTF2IRD2BQ6EKJ0 949 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 DPH6Q7L8W6 267 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 GTF2IRD2Q86UP8 949 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ADGRG5Q8IZF4 528 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ATP6V0D2Q8N8Y2 350 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 TRPV3Q8NET8 790 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 OR52K1Q8NGK4 314 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 USP33Q8TEY7 942 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 AFG1LQ8WV93 481 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 HDAC10Q969S8 669 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 P2RY11Q96G91 374 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 HOPXQ9BPY8 73 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 HERC2P3Q9BVR0 1158 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 LHPPQ9H008 270 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 MUC13Q9H3R2 512 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 RHOJQ9H4E5 214 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 MOV10Q9HCE1 1003 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 INTS10Q9NVR2 710 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 ABCD2Q9UBJ2 740 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ST14Q9Y5Y6 855 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ZNF638Q14966 1978 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 THSD7AQ9UPZ6 1657 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 TTC24A2A3L6 582 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 CCDC78A2IDD5 438 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 NME4O00746 187 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 NRP1O14786 923 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 MSCO60682 206 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 DEAF1O75398 565 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 MYO1DO94832 1006 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ALBP02768 609 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 SLC35E2BP0CK96 405 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 GSTM2P28161 218 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ARL4AP40617 200 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 KPNA2P52292 529 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 DNAJB13P59910 316 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ARPC4P59998 168 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 STX1BP61266 288 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 SELENBP1Q13228 472 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 USP10Q14694 798 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 SPATS1Q496A3 300 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 RBM48Q5RL73 367 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 XAF1Q6GPH4 301 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 PLEKHG7Q6ZR37 379 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 NEK10Q6ZWH5 1172 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 CHST15Q7LFX5 561 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 SPPL2CQ8IUH8 684 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 ACVR1CQ8NER5 493 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.79□□□□□ -0.84
TCF4-208ENST00000543082 ERLEC1Q96DZ1 483 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 VMP1Q96GC9 406 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 PRMT6Q96LA8 375 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 CSF3RQ99062 836 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 EML4Q9HC35 981 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 ZNF302Q9NR11 478 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 IARS2Q9NSE4 1012 aaKnown RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 SEPT10Q9P0V9 454 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 RCOR3Q9P2K3 495 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 TSPAN16Q9UKR8 245 aa9.79□□□□□ -0.84
TCF4-208ENST00000543082 CTDP1Q9Y5B0 961 aaPredicted RBP9.79□□□□□ -0.84
TCF4-208ENST00000543082 MAGEB16A2A368 324 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 C16orf96A6NNT2 1141 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 MFSD11O43934 449 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 SYNCRIPO60506 623 aaKnown RBP9.78□□□□□ -0.84
TCF4-208ENST00000543082 F7P08709 466 aaPredicted RBP9.78□□□□□ -0.84
TCF4-208ENST00000543082 GFAPP14136 432 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 CYP3A5P20815 502 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 PAX3P23760 479 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 RFC2P35250 354 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 ARCN1P48444 511 aaKnown RBP9.78□□□□□ -0.84
TCF4-208ENST00000543082 GTF2A2P52657 109 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 TPTEP56180 551 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 SNX16P57768 344 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 CBX2Q14781 532 aaPredicted RBP9.78□□□□□ -0.84
TCF4-208ENST00000543082 SPCS2Q15005 226 aa9.78□□□□□ -0.84
TCF4-208ENST00000543082 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms