RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 NUDCD1Q96RS6 583 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 OLFM1Q99784 485 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 HAUS8Q9BT25 410 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 NDEL1Q9GZM8 345 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 VPS16Q9H269 839 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 HOMER2Q9NSB8 354 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 ABHD10Q9NUJ1 306 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 ARHGEF38Q9NXL2 777 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 STK32BQ9NY57 414 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 UVRAGQ9P2Y5 699 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 RNF7Q9UBF6 113 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 STK39Q9UEW8 545 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 DLEC1Q9Y238 1755 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 LRP5O75197 1615 aa6.02□□□□□ -1.45
XRCC4-206ENST00000542685 MROH7-TTC4A0A0A0MT08 1334 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 GAKO14976 1311 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 CFAP69A5D8W1 941 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 WIPF3A6NGB9 483 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SYCE1LA8MT33 242 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 E7EWF7 191 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 H0YGN5 161 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 CTNND1O60716 968 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SNX2O60749 519 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ZC3H11AO75152 810 aaKnown RBP eCLIP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ATP1A1P05023 1023 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 POU2F2P09086 479 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TYRP14679 529 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 BDNFP23560 247 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SYKP43405 635 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 MMP13P45452 471 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 PLCD1P51178 756 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 HNRNPFP52597 415 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TNNC1P63316 161 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 MECOMQ03112 1051 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 RNASELQ05823 741 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SLC34A1Q06495 639 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TEFQ10587 303 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 WASHC5Q12768 1159 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TRAP1Q12931 704 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 BMPR2Q13873 1038 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 BOP1Q14137 746 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 CCDC6Q16204 474 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 PGS1Q32NB8 556 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ANKDD1AQ495B1 522 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 CFAP221Q4G0U5 840 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TMEM119Q4V9L6 283 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ODF2Q5BJF6 829 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SIGIRRQ6IA17 410 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 NIPAL1Q6NVV3 410 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TMEM108Q6UXF1 575 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 PPP1R32Q7Z5V6 425 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 LONP2Q86WA8 852 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 CSGALNACT2Q8N6G5 542 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TERB1Q8NA31 727 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SPATA5Q8NB90 893 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 FAM46DQ8NEK8 389 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 OR7G1Q8NGA0 311 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 DDI1Q8WTU0 396 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SCFD1Q8WVM8 642 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 DDX17Q92841 729 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TMA16Q96EY4 203 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 LRGUKQ96M69 825 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 RIOK1Q9BRS2 568 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 UQCC2Q9BRT2 126 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ISCUQ9H1K1 167 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 BOLA2Q9H3K6 86 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 C10orf88Q9H8K7 445 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 TYW1Q9NV66 732 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ETNK2Q9NVF9 386 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 ZDHHC7Q9NXF8 308 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 DDX56Q9NY93 547 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 STX18Q9P2W9 335 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SEC63Q9UGP8 760 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 DBNLQ9UJU6 430 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 MAFFQ9ULX9 164 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 NFS1Q9Y697 457 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 USH1CQ9Y6N9 552 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.01□□□□□ -1.45
XRCC4-206ENST00000542685 KIF13AQ9H1H9 1805 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 PLCH1Q4KWH8 1693 aa6.01□□□□□ -1.45
XRCC4-206ENST00000542685 AKAP11Q9UKA4 1901 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CCDC169A6NNP5 214 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 H3BUI4 141 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 BOLA2-SMG1P6H3BVE0 249 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 HAT1O14929 419 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 PPM1DO15297 605 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ATP2C2O75185 946 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 DCTN3O75935 186 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 CIAO1O76071 339 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 STAMBPO95630 424 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 OXSR1O95747 527 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 AGTP01019 485 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 PRKCGP05129 697 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 IDEP14735 1019 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 NDUFB7P17568 137 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 IL4RP24394 825 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 ATP5DP30049 168 aa6□□□□□ -1.45
XRCC4-206ENST00000542685 HPDP32754 393 aaPredicted RBP6□□□□□ -1.45
XRCC4-206ENST00000542685 KRT2P35908 639 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms