RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 FLRT2O43155 660 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 COMTP21964 271 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 KCNA4P22459 653 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 PMLP29590 882 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 SCNN1BP51168 640 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 CLDN2P57739 230 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 GBE1Q04446 702 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 BCL2L1Q07817 233 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 SLC10A2Q12908 348 aaPredicted RBP15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 ZNF235Q14590 738 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 SUZ12Q15022 739 aaKnown RBP15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 TAZQ16635 292 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 MARC1Q5VT66 337 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 RAD9BQ6WBX8 426 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 GLRX5Q86SX6 157 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 TMEM139Q8IV31 216 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 RHOT1Q8IXI2 618 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 OXR1Q8N573 874 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 SAP25Q8TEE9 199 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 CENPTQ96BT3 561 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 NUDCD1Q96RS6 583 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 MYOCQ99972 504 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 PCDH12Q9NPG4 1184 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 LUC7LQ9NQ29 371 aaKnown RBP15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 DTLQ9NZJ0 730 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 IMPACTQ9P2X3 320 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 WASF3Q9UPY6 502 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 BTBD3Q9Y2F9 522 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 REXO2Q9Y3B8 237 aaKnown RBP15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 HYOU1Q9Y4L1 999 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 ALG6Q9Y672 507 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 ASPMQ8IZT6 3477 aa15.59■□□□□ 0.09
ECHDC2-223ENST00000542552 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SPAARA0A1B0GVQ0 90 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 TTC24A2A3L6 582 aaPredicted RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 LRRD1A4D1F6 860 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 RCCD1A6NED2 376 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 POM121BA6NF01 834 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 RIOK3O14730 519 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 MATN3O15232 486 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 YKT6O15498 198 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 HTRA2O43464 458 aaPredicted RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 MMP20O60882 483 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 THEGLP0DJG4 465 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 CCNCP24863 283 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 MMP12P39900 470 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 MMP13P45452 471 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 NOP2P46087 812 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 ELP6Q0PNE2 266 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SGCGQ13326 291 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 IFI16Q16666 785 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 RALGPS1Q5JS13 557 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SLC9A4Q6AI14 798 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 KYAT3Q6YP21 454 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 KANSL1Q7Z3B3 1105 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 DCP2Q8IU60 420 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SLC22A18ASQ8N1D0 253 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 PLD5Q8N7P1 536 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 DENND6BQ8NEG7 585 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 OR13H1Q8NG92 308 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SETD7Q8WTS6 366 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 NSMCE1Q8WV22 266 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 ANP32EQ9BTT0 268 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 NOD2Q9HC29 1040 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 DDX56Q9NY93 547 aaKnown RBP15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 SALL4Q9UJQ4 1053 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 ATP8A1Q9Y2Q0 1164 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 AKAP13Q12802 2813 aa15.58■□□□□ 0.08
ECHDC2-223ENST00000542552 FRYQ5TBA9 3013 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 A6NNZ2 444 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 SPOPO43791 374 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 SOCS5O75159 536 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 MX2P20592 715 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 EPHA8P29322 1005 aaPredicted RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 GRK6P43250 576 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 ARRB1P49407 418 aaPredicted RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 POLR2LP62875 67 aaKnown RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 SIM1P81133 766 aaPredicted RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 IL9RQ01113 521 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 AGERQ15109 404 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 TRIP6Q15654 476 aaKnown RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 ZFYVE27Q5T4F4 411 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 ALG1LQ6GMV1 187 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 TIGD7Q6NT04 549 aaPredicted RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 C11orf63Q6NUN7 778 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 ERAP2Q6P179 960 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 Q6ZSR6 202 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 BBS5Q8N3I7 341 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 CXorf40AQ8TE69 158 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 WRAP53Q9BUR4 548 aaKnown RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 AMACRQ9UHK6 382 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 WDFY3Q8IZQ1 3526 aa15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 COL5A1P20908 1838 aaPredicted RBP15.57■□□□□ 0.08
ECHDC2-223ENST00000542552 ARID1BQ8NFD5 2236 aaPredicted RBP15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 CFAP69A5D8W1 941 aa15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 BTNL10A8MVZ5 291 aa15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 FPGTO14772 594 aa15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 PSTPIP1O43586 416 aa15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 TM7SF2O76062 418 aa15.56■□□□□ 0.08
ECHDC2-223ENST00000542552 MAP3K6O95382 1288 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms