RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 RMDN1Q96DB5 314 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 MRPL38Q96DV4 380 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 ATXN7L3BQ96GX2 97 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 RPL10LQ96L21 214 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 CDCA3Q99618 268 aaPredicted RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 CPNE1Q99829 537 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 TM6SF2Q9BZW4 377 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 MRM3Q9HC36 420 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 TREX1Q9NSU2 369 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 LHX3Q9UBR4 397 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 PRKAG3Q9UGI9 489 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 RAI2Q9Y5P3 530 aa11.11□□□□□ -0.63
SCG3-202ENST00000542355 MTCL1Q9Y4B5 1905 aaKnown RBP11.11□□□□□ -0.63
SCG3-202ENST00000542355 GMNCA6NCL1 334 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 RFPL1O75677 317 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 NDST3O95803 873 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 FGF1P05230 155 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ITGA2BP08514 1039 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 PDHA1P08559 390 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 PAMP19021 973 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 CNTFP26441 200 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ARNTP27540 789 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 PITRM1Q5JRX3 1037 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 GRTP1Q5TC63 336 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 RNF43Q68DV7 783 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ASTLQ6HA08 431 aaPredicted RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 ZNF771Q7L3S4 317 aaPredicted RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 CELF5Q8N6W0 485 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 DENND1AQ8TEH3 1009 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 TIFAQ96CG3 184 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 LMLNQ96KR4 655 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ASB16Q96NS5 453 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 TRIB3Q96RU7 358 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 RANBP9Q96S59 729 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 FAM107BQ9H098 131 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 C12orf65Q9H3J6 166 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 CAPN10Q9HC96 672 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 SSU72Q9NP77 194 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 LINC01565O15544 149 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 PRLP01236 227 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ALADP13716 330 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 FSHRP23945 695 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 CTSOP43234 321 aaPredicted RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 ARCN1P48444 511 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 PLK1P53350 603 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 SLC18A1P54219 525 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 WDR4P57081 412 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 PDE1BQ01064 536 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 SLC18A2Q05940 514 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 SLC12A1Q13621 1099 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 SEPT7Q16181 437 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 FAM78AQ5JUQ0 283 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 TSTD2Q5T7W7 516 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 NCEH1Q6PIU2 408 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 MICALCLQ6ZW33 695 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 OR6K2Q8NGY2 324 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 TCP10LQ8TDR4 215 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 FGF13Q92913 245 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 PPP2R3CQ969Q6 453 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 RSPRY1Q96DX4 576 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 TDRD1Q9BXT4 1180 aaKnown RBP11.1□□□□□ -0.63
SCG3-202ENST00000542355 SLC13A1Q9BZW2 595 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 KCTD3Q9Y597 815 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 ARL5AQ9Y689 179 aa11.1□□□□□ -0.63
SCG3-202ENST00000542355 MROH6A6NGR9 719 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 SLC9A3R1O14745 358 aaPredicted RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 LDB2O43679 373 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 BUD23O43709 281 aaKnown RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 ASMTLO95671 621 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 GLP2RO95838 553 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 ABCG1P45844 678 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 CTBP1Q13363 440 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 THOC5Q13769 683 aaKnown RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 SLC14A2Q15849 920 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 FUT11Q495W5 492 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 TRIM68Q6AZZ1 485 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 TIFABQ6ZNK6 161 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 GET4Q7L5D6 327 aaPredicted RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 NPAS3Q8IXF0 933 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 LPCAT1Q8NF37 534 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 BRSK1Q8TDC3 778 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 PTPRN2Q92932 1015 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 OTUB2Q96DC9 234 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 BRINP2Q9C0B6 783 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 IRF2BPLQ9H1B7 796 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 TNKS2Q9H2K2 1166 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 DZANK1Q9NVP4 752 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 DUS2Q9NX74 493 aaKnown RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.09□□□□□ -0.63
SCG3-202ENST00000542355 GGA2Q9UJY4 613 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 GBF1Q92538 1859 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 CCL22O00626 93 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 COPEO14579 308 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 TRIM24O15164 1050 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 ZWINTO95229 277 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 PAPSS2O95340 614 aaPredicted RBP11.09□□□□□ -0.63
SCG3-202ENST00000542355 PAPLNO95428 1278 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 WEE1P30291 646 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 SLC8A1P32418 973 aa11.09□□□□□ -0.63
SCG3-202ENST00000542355 SPRP35270 261 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms