RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 RGRP47804 291 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 CYTH1Q15438 398 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 TGIF1Q15583 401 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 STRADAQ7RTN6 431 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 HID1Q8IV36 788 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 SDR16C5Q8N3Y7 309 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 WDR36Q8NI36 951 aaKnown RBP15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 CXorf40AQ8TE69 158 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 BTN2A2Q8WVV5 523 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 WBP1Q96G27 269 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 PDXPQ96GD0 296 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 GDAP1L1Q96MZ0 367 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 OSBPL1AQ9BXW6 950 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 NLRC4Q9NPP4 1024 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 NCKIPSDQ9NZQ3 722 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 GULP1Q9UBP9 304 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 OR1A2Q9Y585 309 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 GTF3C3Q9Y5Q9 886 aa15.63■□□□□ 0.09
CLSTN3-213ENST00000541953 CCDC187A0A096LP49 1063 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 CXorf51AA0A1B0GTR3 108 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 D6RAR5 112 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 CCP110O43303 1012 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 NOBOXO60393 691 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 UNGP13051 313 aaPredicted RBP15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 C6P13671 934 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 ETFBP38117 255 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 POLR2FP61218 127 aaKnown RBP15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 RHOAP61586 193 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 YPEL5P62699 121 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 CCL7P80098 99 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 PPARDQ03181 441 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 SPIDRQ14159 915 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 PTK2BQ14289 1009 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 ZSCAN23Q3MJ62 389 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 TCP11X2Q5H9J9 407 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 WDR59Q6PJI9 974 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 ZSCAN30Q86W11 494 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 ZNF354CQ86Y25 554 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 FAM114A1Q8IWE2 563 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 RTL3Q8N8U3 475 aaKnown RBP15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 EXD3Q8N9H8 876 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 PLA2G15Q8NCC3 412 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 NTAN1Q96AB6 310 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 TBATAQ96M53 351 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 NSMCE3Q96MG7 304 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 SLC13A1Q9BZW2 595 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 EPB41L5Q9HCM4 733 aa15.62■□□□□ 0.09
CLSTN3-213ENST00000541953 TCRBV5S1A1TA0A578 114 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 RASA4BC9J798 803 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 RASA4O43374 803 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 BUB1BO60566 1050 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 IGSF6O95976 241 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 HK3P52790 923 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 GEMIN4P57678 1058 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 ARL13BQ3SXY8 428 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 TMEM52BQ4KMG9 183 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 RD3Q7Z3Z2 195 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 TMPRSS9Q7Z410 1059 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 PELI3Q8N2H9 469 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 ARL10Q8N8L6 244 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 MSANTD4Q8NCY6 345 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 TPCN2Q8NHX9 752 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 NAT6Q93015 286 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 COL26A1Q96A83 441 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 ARHGEF26Q96DR7 871 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 LIN37Q96GY3 246 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 CPEB1Q9BZB8 566 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 VPS16Q9H269 839 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 PDFQ9HBH1 243 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 PCDH12Q9NPG4 1184 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 FAM207AQ9NSI2 230 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 GPATCH2LQ9NWQ4 482 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 DKK3Q9UBP4 350 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 ATXN7L1Q9ULK2 861 aaPredicted RBP15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 HPCAL4Q9UM19 191 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 MFHAS1Q9Y4C4 1052 aa15.61■□□□□ 0.09
CLSTN3-213ENST00000541953 UBR5O95071 2799 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 RELNP78509 3460 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 TSPAN11A1L157 253 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 B8ZZF3 427 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 J3KR12 359 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 PCCBP05166 539 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 RPLP0P05388 317 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 ITGA2BP08514 1039 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 GM2AP17900 193 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 GPD1P21695 349 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 ERCC5P28715 1186 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 EPHB2P29323 1055 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 SLC5A2P31639 672 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 UGT1A5P35504 534 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 SOX5P35711 763 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 RPIAP49247 311 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 RPL7AP62424 266 aaKnown RBP15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 OGDHQ02218 1023 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 SERINC3Q13530 473 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 INPP5AQ14642 412 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 NFATC4Q14934 902 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 LRRC14Q15048 493 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 ENPP7Q6UWV6 458 aa15.6■□□□□ 0.09
CLSTN3-213ENST00000541953 ZNF677Q86XU0 584 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms