RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 MTRRQ9UBK8 725 aa17.33■□□□□ 0.36
SPIDR-227ENST00000541342 FGF10O15520 208 aaPredicted RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 HSPA4LO95757 839 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 ALDH1A3P47895 512 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 SERPINB8P50452 374 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 NRG1Q02297 640 aaPredicted RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 SMARCB1Q12824 385 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 GRAMD1BQ3KR37 738 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 SLC8B1Q6J4K2 584 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 TMEM135Q86UB9 458 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 TDRD5Q8NAT2 981 aaKnown RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 C1orf74Q96LT6 269 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 BTBD9Q96Q07 612 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 A0A096LPK6 155 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 SBK3P0C264 359 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 NFKB1P19838 968 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 MPSTP25325 297 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 HTR7P34969 479 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 PSMD5Q16401 504 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 USP41Q3LFD5 358 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 KCTD11Q693B1 232 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 MIB1Q86YT6 1006 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 PQLC1Q8N2U9 271 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 C2orf15Q8WU43 125 aaKnown RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 ZNF669Q96BR6 464 aaPredicted RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 GATA5Q9BWX5 397 aaPredicted RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 CATSPERBQ9H7T0 1116 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 TCF7L2Q9NQB0 619 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 TLR8Q9NR97 1041 aaKnown RBP17.32■□□□□ 0.36
SPIDR-227ENST00000541342 STK39Q9UEW8 545 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 COMMD3-BMI1R4GMX3 469 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 MTSS1O43312 755 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 JCHAINP01591 159 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 CSRP3P50461 194 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 THOP1P52888 689 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 FSCBQ5H9T9 825 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 ISLR2Q6UXK2 745 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 CNTD1Q8N815 330 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 MFSD3Q96ES6 412 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 PPP1R36Q96LQ0 422 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 TEKT5Q96M29 485 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 CCSER2Q9H7U1 834 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 VANGL2Q9ULK5 521 aa17.32■□□□□ 0.36
SPIDR-227ENST00000541342 SLC38A8A6NNN8 435 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 DNAJA2O60884 412 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 PGM3O95394 542 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 PIK3R1P27986 724 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 OR1D2P34982 312 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MSX2P35548 267 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 SLC5A9Q2M3M2 681 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MS4A13Q5J8X5 152 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 AFMIDQ63HM1 303 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 DCUN1D1Q96GG9 259 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 CNDP1Q96KN2 507 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 NDNQ99608 321 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 UBE2OQ9C0C9 1292 aaKnown RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TRHDEQ9UKU6 1024 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MATN2O00339 956 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 AIM2O14862 343 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MAFKO60675 156 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 ZNF189O75820 626 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 AP2A1O95782 977 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 ZDHHC11BP0C7U3 371 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 DPP6P42658 865 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 NUDT2P50583 147 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 RPL26P61254 145 aaKnown RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 C10orf120Q5SQS8 335 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 METTL21CQ5VZV1 264 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 SDCCAG8Q86SQ7 713 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 RTL3Q8N8U3 475 aaKnown RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 USP33Q8TEY7 942 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TSGA13Q96PP4 275 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 ZNF385DQ9H6B1 395 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 OXSMQ9NWU1 459 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 PSMD13Q9UNM6 376 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 DTNAQ9Y4J8 743 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TMEM114B3SHH9 223 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TXNDC9O14530 226 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 C2P06681 752 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 EPHA3P29320 983 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 DYNC1I2Q13409 638 aaKnown RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 GK3PQ14409 553 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 LRRC26Q2I0M4 334 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 HSP90AA5PQ58FG0 334 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 FAM117BQ6P1L5 589 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 SNX32Q86XE0 403 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MARVELD2Q8N4S9 558 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 ICA1LQ8NDH6 482 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TOP1MTQ969P6 601 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 NOL6Q9H6R4 1146 aaKnown RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MARCH2Q9P0N8 246 aa17.31■□□□□ 0.36
SPIDR-227ENST00000541342 MAGED2Q9UNF1 606 aaPredicted RBP17.31■□□□□ 0.36
SPIDR-227ENST00000541342 TK2O00142 265 aa17.3■□□□□ 0.36
SPIDR-227ENST00000541342 DENRO43583 198 aaKnown RBP17.3■□□□□ 0.36
SPIDR-227ENST00000541342 JUNP05412 331 aaKnown RBP17.3■□□□□ 0.36
SPIDR-227ENST00000541342 HMBSP08397 361 aa17.3■□□□□ 0.36
SPIDR-227ENST00000541342 CLTBP09497 229 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms