RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 A8MT66 165 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 DYNC1LI2O43237 492 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ATXN3P54252 364 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 YBX1P67809 324 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TIAL1Q01085 375 aaKnown RBP eCLIP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 CNGA3Q16281 694 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 KIAA0930Q6ICG6 404 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 LINC00523Q86TU6 105 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ZFP28Q8NHY6 868 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 PIP4K2CQ8TBX8 421 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ANKRD49Q8WVL7 239 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 IRGQQ8WZA9 623 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 DLG3Q92796 817 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ZNF597Q96LX8 424 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 SERPINI1Q99574 410 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 PCDHAC1Q9H158 963 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 GSTO2Q9H4Y5 243 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 POMKQ9H5K3 350 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 MRPL42Q9Y6G3 142 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 SCN8AQ9UQD0 1980 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TCRBV3S1A0A5B6 114 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TRIM38O00635 465 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 F9P00740 461 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TM4SF4P48230 202 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 PSEN2P49810 448 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 KLHDC10Q6PID8 442 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 MYLPFQ96A32 169 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 SCYL1Q96KG9 808 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TMEM209Q96SK2 561 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 MRPL57Q9BQC6 102 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TRPV6Q9H1D0 765 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 CCL15-CCL14A0A0B4J2E2 113 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TXNDC9O14530 226 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 MATN3O15232 486 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 IRAK2O43187 625 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 MMP2P08253 660 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 CYBAP13498 195 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 STMN1P16949 149 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 RPL5P46777 297 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 CCL15Q16663 113 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 EML3Q32P44 896 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 UGT3A2Q3SY77 523 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TIGD5Q53EQ6 642 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 RBM44Q6ZP01 1051 aaKnown RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 LRRTM3Q86VH5 581 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 FUNDC1Q8IVP5 155 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ZNF683Q8IZ20 524 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 TMEM86AQ8N2M4 240 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 SNX31Q8N9S9 440 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 IPMKQ8NFU5 416 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 OR13J1Q8NGT2 312 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 EFCAB1Q9HAE3 211 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 POLR3BQ9NW08 1133 aaPredicted RBP9.62□□□□□ -0.87
CNOT4-212ENST00000541284 CDH9Q9ULB4 789 aa9.62□□□□□ -0.87
CNOT4-212ENST00000541284 ANAPC1Q9H1A4 1944 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ANKRD36A6QL64 1941 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PDLIM1O00151 329 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 DLGAP1O14490 977 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 CFLARO15519 480 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ATP5F1P24539 256 aaPredicted RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PCSK6P29122 969 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PSME3P61289 254 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 TXNL4AP83876 142 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 DYNC1I2Q13409 638 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ARL13BQ3SXY8 428 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 REP15Q6BDI9 236 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PIWIL4Q7Z3Z4 852 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 CARM1Q86X55 608 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PTCD2Q8WV60 388 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 DGCR14Q96DF8 476 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 SGF29Q96ES7 293 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 SMARCD1Q96GM5 515 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 MRPS26Q9BYN8 205 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ARNT2Q9HBZ2 717 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PTTG2Q9NZH5 202 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 AAR2Q9Y312 384 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 A0A087X1B8 175 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 AP3B1O00203 1094 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PSMD3O43242 534 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 SRGAP2BP0DMP2 458 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 LHX1P48742 406 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 MAP2K5Q13163 448 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 UPP1Q16831 310 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 TRIM71Q2Q1W2 868 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 RARS2Q5T160 578 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ZNF470Q6ECI4 717 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 POTEHQ6S545 545 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 BEND5Q7L4P6 421 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PLEKHH3Q7Z736 793 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 C14orf80Q86SX3 495 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PCDH20Q8N6Y1 951 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 SCAMP5Q8TAC9 235 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 LPPQ93052 612 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 TADA1Q96BN2 335 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 CNBD2Q96M20 576 aa9.61□□□□□ -0.87
CNOT4-212ENST00000541284 ZNF512Q96ME7 567 aaPredicted RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 PARK7Q99497 189 aaKnown RBP9.61□□□□□ -0.87
CNOT4-212ENST00000541284 SLC29A1Q99808 456 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms