RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 TASP1Q9H6P5 420 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 ECT2Q9H8V3 914 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 EIF2B3Q9NR50 452 aaKnown RBP8.52□□□□□ -1.05
CHD4-208ENST00000540960 ABI2Q9NYB9 513 aaPredicted RBP8.52□□□□□ -1.05
CHD4-208ENST00000540960 IL37Q9NZH6 218 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 SLC24A2Q9UI40 661 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 ADAM21Q9UKJ8 722 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 SSUH2Q9Y2M2 353 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 HEY1Q9Y5J3 304 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 ACTL7BQ9Y614 415 aa8.52□□□□□ -1.05
CHD4-208ENST00000540960 MYOFQ9NZM1 2061 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 FAM92AA1XBS5 289 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 AGPSO00116 658 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 KCNN4O15554 427 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 SOAT2O75908 522 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 MLNP12872 115 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TPSB2P20231 275 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 IL4RP24394 825 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 WEE1P30291 646 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 RPL22P35268 128 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 TIE1P35590 1138 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 HNF1BP35680 557 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 OPRD1P41143 372 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 LMAN1P49257 510 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 SLC5A3P53794 718 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 SKOR1P84550 965 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ZNF844Q08AG5 666 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 DNAJC3Q13217 504 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 SLC29A2Q14542 456 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 VEPH1Q14D04 833 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TPSAB1Q15661 275 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TAF12Q16514 161 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 PARP6Q2NL67 630 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ANO4Q32M45 955 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ZC3H12AQ5D1E8 599 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 HES3Q5TGS1 186 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TMCO4Q5TGY1 634 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TIGD7Q6NT04 549 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 TRNP1Q6NT89 227 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 KDM7AQ6ZMT4 941 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 DENND5BQ6ZUT9 1274 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 CYP4V2Q6ZWL3 525 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 DNAJB7Q7Z6W7 309 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 TDRPQ86YL5 185 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 UNC45BQ8IWX7 931 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 PALM2Q8IXS6 379 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 SRRM1Q8IYB3 904 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 PQLC3Q8N755 202 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ATP6V0D2Q8N8Y2 350 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 FAM71DQ8N9W8 422 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ZMIZ2Q8NF64 920 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 PYROXD1Q8WU10 500 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 HTR3CQ8WXA8 447 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ERLEC1Q96DZ1 483 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ZNF419Q96HQ0 510 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 KCTD15Q96SI1 283 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 KCNK16Q96T55 309 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 DDX50Q9BQ39 737 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 ZDHHC5Q9C0B5 715 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 ARHGEF4Q9NR80 690 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 CWC15Q9P013 229 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 UXTQ9UBK9 157 aaPredicted RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 AFF4Q9UHB7 1163 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 NAALADL1Q9UQQ1 740 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 TLR6Q9Y2C9 796 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 HBS1LQ9Y450 684 aaKnown RBP8.51□□□□□ -1.05
CHD4-208ENST00000540960 NFS1Q9Y697 457 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 IKBKGQ9Y6K9 419 aa8.51□□□□□ -1.05
CHD4-208ENST00000540960 A0A0A0MRY4 1105 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 MAGEB16A2A368 324 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 H3BQF6 201 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 K7ENP7 123 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 IRAK2O43187 625 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 HCRTO43612 131 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 OBSL1O75147 1896 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 BEST1O76090 585 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 IGLV3-25P01717 112 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CD48P09326 243 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 OR4Q2P0C623 313 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CSH1P0DML2 217 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CSH2P0DML3 217 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 HAPLN1P10915 354 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 GABRG2P18507 467 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 NR1D1P20393 614 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 GRNP28799 593 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 STX2P32856 288 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 ALDH1A3P47895 512 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 VPS41P49754 854 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 BASP1P80723 227 aaKnown RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 IFRD2Q12894 506 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 LLGL1Q15334 1064 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 TRADDQ15628 312 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 TRIP13Q15645 432 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 CCDC38Q502W7 563 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 NUGGCQ68CJ6 796 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 ZNF449Q6P9G9 518 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 INO80CQ6PI98 192 aaPredicted RBP8.5□□□□□ -1.05
CHD4-208ENST00000540960 KLHDC10Q6PID8 442 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 SLC36A4Q6YBV0 504 aa8.5□□□□□ -1.05
CHD4-208ENST00000540960 CYS1Q717R9 158 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms