RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 LGMNQ99538 433 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 GAREM1Q9H706 876 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 IL21RQ9HBE5 538 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 NOD2Q9HC29 1040 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 FZD3Q9NPG1 666 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 PCDH12Q9NPG4 1184 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 DMTF1Q9Y222 760 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 CA5BQ9Y2D0 317 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TTLL3Q9Y4R7 772 aa9.32□□□□□ -0.92
SNHG1-215ENST00000540904 TNRC6BQ9UPQ9 1833 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 NUP205Q92621 2012 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 A0A1W2PR77 199 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 TSPAN11A1L157 253 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 UPK3BL1B0FP48 263 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 UPK3BL2E5RIL1 263 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 H0Y8X5 98 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 KCNK1O00180 336 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 TRAFD1O14545 582 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 TM4SF5O14894 197 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 AREL1O15033 823 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CST8O60676 142 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 MMP20O60882 483 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CER1O95813 267 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 PAK4O96013 591 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 HNRNPA2B1P22626 353 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 AKT2P31751 481 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CTNNA1P35221 906 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CLDN2P57739 230 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 SEMG2Q02383 582 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 AP1B1Q10567 949 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 TFDP2Q14188 446 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 FGL2Q14314 439 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 PDK1Q15118 436 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 TFDP3Q5H9I0 405 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 ERAP2Q6P179 960 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 B4GALNT4Q76KP1 1039 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 ZSWIM9Q86XI8 627 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 LRRC8AQ8IWT6 810 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC13Q8IYE1 715 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 LRRC57Q8N9N7 239 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 MFSD2AQ8NA29 543 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC112Q8NEF3 446 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 CXorf40AQ8TE69 158 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 MAML1Q92585 1016 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 RBM41Q96IZ5 413 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 NUDCD1Q96RS6 583 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 SEMA3CQ99985 751 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 WRAP53Q9BUR4 548 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 HEMGNQ9BXL5 484 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 SLC17A9Q9BYT1 436 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 DNAAF2Q9NVR5 837 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 HAUS2Q9NVX0 235 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 RBM22Q9NW64 420 aaKnown RBP eCLIP9.31□□□□□ -0.928e-10■■■■□ 21.5
SNHG1-215ENST00000540904 SAE1Q9UBE0 346 aaPredicted RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 FNDC3AQ9Y2H6 1198 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 PCDHGC4Q9Y5F7 938 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 PCDHA3Q9Y5H8 950 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 NYNRINQ9P2P1 1898 aaKnown RBP9.31□□□□□ -0.92
SNHG1-215ENST00000540904 RALGAPA1Q6GYQ0 2036 aa9.31□□□□□ -0.92
SNHG1-215ENST00000540904 hCG_1818297A0A087WSY0 165 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 CCDC66A2RUB6 948 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 TLR4O00206 839 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 RIOK3O14730 519 aaKnown RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PPP1R12AO14974 1030 aaPredicted RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ARHGAP6O43182 974 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 SOCS5O75159 536 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 FTCDO95954 541 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 JCHAINP01591 159 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PECAM1P16284 738 aaPredicted RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 CR2P20023 1033 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 CTSKP43235 329 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 SUOXP51687 545 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 NXPH1P58417 271 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 POLR2LP62875 67 aaKnown RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 FAM193AP78312 1265 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 IL9RQ01113 521 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 DSC2Q02487 901 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ADCY2Q08462 1091 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PPIDQ08752 370 aaKnown RBP9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ELP6Q0PNE2 266 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 TAZQ16635 292 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PRAMEF14Q5SWL7 426 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 PEX26Q7Z412 305 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 NT5DC3Q86UY8 548 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 IQCHQ86VS3 1027 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ZSCAN30Q86W11 494 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 SYCE1Q8N0S2 351 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 TMEM145Q8NBT3 493 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ALG3Q92685 438 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 P3H4Q92791 437 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 FATE1Q969F0 183 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 HAUS1Q96CS2 278 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 ECHDC3Q96DC8 303 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 KLHDC7BQ96G42 594 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 OLFM3Q96PB7 478 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 C1QTNF2Q9BXJ5 285 aa9.3□□□□□ -0.92
SNHG1-215ENST00000540904 CEP41Q9BYV8 373 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms