RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRIM65-203ENST00000540812 SLC13A1Q9BZW2 595 aa16.42■□□□□ 0.22
TRIM65-203ENST00000540812 THSD1Q9NS62 852 aa16.42■□□□□ 0.22
TRIM65-203ENST00000540812 DKK3Q9UBP4 350 aa16.42■□□□□ 0.22
TRIM65-203ENST00000540812 LHX3Q9UBR4 397 aa16.42■□□□□ 0.22
TRIM65-203ENST00000540812 SIGLEC16A6NMB1 481 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 KLK10O43240 276 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 CREB3O43889 395 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 CALB1P05937 261 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 ANXA6P08133 673 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 TMPRSS3P57727 454 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 RPL7AP62424 266 aaKnown RBP16.41■□□□□ 0.22
TRIM65-203ENST00000540812 PPARDQ03181 441 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 SERINC3Q13530 473 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 TMEM52BQ4KMG9 183 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 BROXQ5VW32 411 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 DNAJC24Q6P3W2 148 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 IGF2-ASQ6U949 168 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 CASKIN2Q8WXE0 1202 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 TBATAQ96M53 351 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 SLC46A1Q96NT5 459 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 CCDC3Q9BQI4 270 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 C1QTNF7Q9BXJ2 289 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 SEPT11Q9NVA2 429 aaKnown RBP16.41■□□□□ 0.22
TRIM65-203ENST00000540812 FANCLQ9NW38 375 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 FZD10Q9ULW2 581 aa16.41■□□□□ 0.22
TRIM65-203ENST00000540812 WASH4PA8MWX3 477 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 ERVH48-1M5A8F1 160 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 RIOK3O14730 519 aaKnown RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 TCEA3O75764 348 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 TPM2P07951 284 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 RBMS1P29558 406 aaKnown RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 RPIAP49247 311 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 ZNF143P52747 638 aaPredicted RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 COPB1P53618 953 aaKnown RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 YBEYP58557 167 aaPredicted RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 SKOR1P84550 965 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 OGDHQ02218 1023 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 ALG11Q2TAA5 492 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 WSCD2Q2TBF2 565 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 PARP15Q460N3 678 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 PPP1R15BQ5SWA1 713 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 HID1Q8IV36 788 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 KYQ8NBH2 561 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 GLMNQ92990 594 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 NAT6Q93015 286 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 TSACCQ96A04 125 aaPredicted RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 GRAMD1AQ96CP6 724 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 MCEEQ96PE7 176 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 CPEB1Q9BZB8 566 aaKnown RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 PCDH12Q9NPG4 1184 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 UBA2Q9UBT2 640 aaPredicted RBP16.4■□□□□ 0.22
TRIM65-203ENST00000540812 PADI4Q9UM07 663 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 DAAM1Q9Y4D1 1078 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 PCDHGA8Q9Y5G5 932 aa16.4■□□□□ 0.22
TRIM65-203ENST00000540812 TSPAN11A1L157 253 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 TOR1BO14657 336 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 BUB1BO60566 1050 aaPredicted RBP16.39■□□□□ 0.21
TRIM65-203ENST00000540812 PRKCGP05129 697 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 C6P13671 934 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 PLA2G2AP14555 144 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 XPAP23025 273 aaPredicted RBP16.39■□□□□ 0.21
TRIM65-203ENST00000540812 UCNP55089 124 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 CFHR1Q03591 330 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 LRRC14Q15048 493 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 TAF1BQ53T94 588 aaPredicted RBP16.39■□□□□ 0.21
TRIM65-203ENST00000540812 CCDC183Q5T5S1 534 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 KCTD16Q68DU8 428 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 FOXR1Q6PIV2 292 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 ZSWIM9Q86XI8 627 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 UMODL1-AS1Q8N2C9 162 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 PCDH19Q8TAB3 1148 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 PCMTD1Q96MG8 357 aaPredicted RBP16.39■□□□□ 0.21
TRIM65-203ENST00000540812 AGPAT1Q99943 283 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 NCAPGQ9BPX3 1015 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 DPH1Q9BZG8 443 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 SUV39H2Q9H5I1 410 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 LRRC19Q9H756 370 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 CATSPERBQ9H7T0 1116 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 SYNDIG1Q9H7V2 258 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 PDFQ9HBH1 243 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 GPATCH2LQ9NWQ4 482 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 SIRPGQ9P1W8 387 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 GULP1Q9UBP9 304 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 RABGEF1Q9UJ41 708 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 BSNQ9UPA5 3926 aa16.39■□□□□ 0.21
TRIM65-203ENST00000540812 LGALS16A8MUM7 142 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 CDRT15L2A8MXV6 281 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 J3KR12 359 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 NTN3O00634 580 aaPredicted RBP16.38■□□□□ 0.21
TRIM65-203ENST00000540812 PEX5P50542 639 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 HK3P52790 923 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 ELP6Q0PNE2 266 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 INPP5AQ14642 412 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 NFATC4Q14934 902 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 UGP2Q16851 508 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 ESRP1Q6NXG1 681 aaKnown RBP16.38■□□□□ 0.21
TRIM65-203ENST00000540812 ENPP7Q6UWV6 458 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 B3GNT8Q7Z7M8 397 aa16.38■□□□□ 0.21
TRIM65-203ENST00000540812 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms