RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 C3orf20Q8ND61 904 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 OR6C4Q8NGE1 309 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 LIN37Q96GY3 246 aaPredicted RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 SELENOOQ9BVL4 669 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 MAGEB5Q9BZ81 275 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 CLPBQ9H078 707 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 NOL6Q9H6R4 1146 aaKnown RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 MBNL1Q9NR56 388 aaKnown RBP12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 DOLKQ9UPQ8 538 aa12.14□□□□□ -0.47
CBX3P4-202ENST00000540428 KALRNO60229 2985 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 CHD5Q8TDI0 1954 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 TSPAN11A1L157 253 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 SIGLEC16A6NMB1 481 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 RASA4BC9J798 803 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 RASA4O43374 803 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 RASGRP1O95267 797 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 CALB1P05937 261 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 XPAP23025 273 aaPredicted RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 RFC1P35251 1148 aaPredicted RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 STAT1P42224 750 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 LRRC14Q15048 493 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 AGERQ15109 404 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 IRF4Q15306 451 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 EFHC2Q5JST6 749 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 WDR59Q6PJI9 974 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 PHLDB2Q86SQ0 1253 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 PHF13Q86YI8 300 aaPredicted RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 ATL2Q8NHH9 583 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 SLC30A5Q8TAD4 765 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 ENOX1Q8TC92 643 aaKnown RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 WRAP53Q9BUR4 548 aaKnown RBP12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 EDEM3Q9BZQ6 932 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 CATSPERBQ9H7T0 1116 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 TAB2Q9NYJ8 693 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 DONSONQ9NYP3 566 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 ADAM22Q9P0K1 906 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 PCDHGA7Q9Y5G6 932 aa12.13□□□□□ -0.47
CBX3P4-202ENST00000540428 COL27A1Q8IZC6 1860 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 J3QKU1 62 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 PLD2O14939 933 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 TNFSF15O95150 251 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ZIC2O95409 532 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 GJB6O95452 261 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 TPM2P07951 284 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 CTSEP14091 401 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ITIH2P19823 946 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 HTR7P34969 479 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ZNF143P52747 638 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 C1QBPQ07021 282 aaKnown RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 SERINC3Q13530 473 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 NFATC4Q14934 902 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 UGP2Q16851 508 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 CLEC16AQ2KHT3 1053 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ALG11Q2TAA5 492 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 WSCD2Q2TBF2 565 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 LRRC73Q5JTD7 316 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 BRAT1Q6PJG6 821 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 CCDC81Q6ZN84 652 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 GKN2Q86XP6 184 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 DNAAF5Q86Y56 855 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 UMODL1-AS1Q8N2C9 162 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 HMCESQ96FZ2 354 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ZNF641Q96N77 438 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 PCDHB18PQ96TA0 734 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 NCAPGQ9BPX3 1015 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 KLC2Q9H0B6 622 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 NUP62CLQ9H1M0 184 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 SUV39H2Q9H5I1 410 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 FAM207AQ9NSI2 230 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 UBA2Q9UBT2 640 aaPredicted RBP12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 ACSL6Q9UKU0 697 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 GTF3C3Q9Y5Q9 886 aa12.12□□□□□ -0.47
CBX3P4-202ENST00000540428 TCRBV5S1A1TA0A578 114 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 ANKRD62A6NC57 917 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 B8ZZF3 427 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 FGF10O15520 208 aaPredicted RBP12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CCP110O43303 1012 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CELA2BP08218 269 aaPredicted RBP12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 C6P13671 934 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CCKBRP32239 447 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 KLK7P49862 253 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CLN3Q13286 438 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 MTM1Q13496 603 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 KRT31Q15323 416 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CYTH1Q15438 398 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 FKBP15Q5T1M5 1219 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 CDKAL1Q5VV42 579 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 ERAP2Q6P179 960 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 FOXR1Q6PIV2 292 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 ENPP7Q6UWV6 458 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 HID1Q8IV36 788 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 PYROXD2Q8N2H3 581 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 PCDH19Q8TAB3 1148 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 MED8Q96G25 268 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 TMEM74Q96NL1 305 aa12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 GFM1Q96RP9 751 aaKnown RBP12.11□□□□□ -0.47
CBX3P4-202ENST00000540428 TUBGCP5Q96RT8 1024 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms