RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ERVPABLB-1P60509 514 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 SKOR1P84550 965 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 MAMLD1Q13495 774 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 C15orf59Q2T9L4 293 aaPredicted RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 WDR59Q6PJI9 974 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 FAM131BQ86XD5 332 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 SLC35F3Q8IY50 421 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 CENPIQ92674 756 aaPredicted RBP15.16■□□□□ 0.02
USB1-203ENST00000539737 SLC46A1Q96NT5 459 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 CNPY3Q9BT09 278 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 FADS3Q9Y5Q0 445 aa15.16■□□□□ 0.02
USB1-203ENST00000539737 SPTY2D1-AS1A0A0U1RR47 76 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 K7ENP7 123 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 CCP110O43303 1012 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 AQP9O43315 295 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 GP1BAP07359 652 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 RECQLP46063 649 aaPredicted RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 VASPP50552 380 aaPredicted RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 RPL7AP62424 266 aaKnown RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 ARF5P84085 180 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 SLC18A3Q16572 532 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 KCTD16Q68DU8 428 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 ALKBH5Q6P6C2 394 aaKnown RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 INO80CQ6PI98 192 aaPredicted RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 KYAT3Q6YP21 454 aaKnown RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 SETD3Q86TU7 594 aaPredicted RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 PARGQ86W56 976 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 SFTPA2Q8IWL1 248 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 TMIEQ8NEW7 156 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 FNIP1Q8TF40 1166 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 VOPP1Q96AW1 172 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 MED8Q96G25 268 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 HAPLN3Q96S86 360 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 HDAC8Q9BY41 377 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 MAGEB5Q9BZ81 275 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 FOXP3Q9BZS1 431 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 CLPBQ9H078 707 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 ZDHHC6Q9H6R6 413 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 SIRPGQ9P1W8 387 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 IPO11Q9UI26 975 aaKnown RBP15.15■□□□□ 0.02
USB1-203ENST00000539737 SSUH2Q9Y2M2 353 aa15.15■□□□□ 0.02
USB1-203ENST00000539737 DOPEY2Q9Y3R5 2298 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 CDRT15L2A8MXV6 281 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 AKR1B10O60218 316 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 SRGAP2O75044 1071 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 ZMPSTE24O75844 475 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 WISP1O95388 367 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 PSMA2P25787 234 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 OR1E1P30953 314 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 IGFALSP35858 605 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 ACVRL1P37023 503 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 CCNHP51946 323 aaPredicted RBP15.14■□□□□ 0.01
USB1-203ENST00000539737 NEK3P51956 506 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 AIF1P55008 147 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 UCNP55089 124 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 HDAC4P56524 1084 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 HNRNPKP61978 463 aaKnown RBP eCLIP15.14■□□□□ 0.01
USB1-203ENST00000539737 KCNC4Q03721 635 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 NR0B2Q15466 257 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 LINC00303Q3SY05 128 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 C5orf22Q49AR2 442 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 CCDC122Q5T0U0 273 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 C6orf132Q5T0Z8 1188 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 ZCCHC8Q6NZY4 707 aaKnown RBP15.14■□□□□ 0.01
USB1-203ENST00000539737 CCDC81Q6ZN84 652 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 RBM44Q6ZP01 1051 aaKnown RBP15.14■□□□□ 0.01
USB1-203ENST00000539737 LSMEM2Q8N112 164 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 NTAN1Q96AB6 310 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 C1orf74Q96LT6 269 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 CCDC42Q96M95 316 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 LRRC61Q9BV99 259 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 NDFIP2Q9NV92 336 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 NENFQ9UMX5 172 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 DOCK4Q8N1I0 1966 aa15.14■□□□□ 0.01
USB1-203ENST00000539737 NEMP2A6NFY4 417 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 CD160O95971 181 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 PRNPP04156 253 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 WT1P19544 449 aaPredicted RBP15.13■□□□□ 0.01
USB1-203ENST00000539737 CDC25BP30305 580 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 CLCN6P51797 869 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 CYP4F2P78329 520 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 ASTE1Q2TB18 679 aaPredicted RBP15.13■□□□□ 0.01
USB1-203ENST00000539737 PRRT3Q5FWE3 981 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 NEK5Q6P3R8 708 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 VASH2Q86V25 355 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 DNAAF5Q86Y56 855 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 RYBPQ8N488 228 aaPredicted RBP15.13■□□□□ 0.01
USB1-203ENST00000539737 DCAF4L2Q8NA75 395 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 EXTL1Q92935 676 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 NCAPGQ9BPX3 1015 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 CCDC3Q9BQI4 270 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 DPH1Q9BZG8 443 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 THAP2Q9H0W7 228 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 NHEJ1Q9H9Q4 299 aaPredicted RBP15.13■□□□□ 0.01
USB1-203ENST00000539737 EPB41L5Q9HCM4 733 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 MBNL1Q9NR56 388 aaKnown RBP15.13■□□□□ 0.01
USB1-203ENST00000539737 MYO1AQ9UBC5 1043 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 GULP1Q9UBP9 304 aa15.13■□□□□ 0.01
USB1-203ENST00000539737 ZNF212Q9UDV6 495 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms