RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	FPGT	O14772	594 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GIPC1	O14908	333 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TNFSF14	O43557	240 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BUB1B	O60566	1050 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TM7SF2	O76062	418 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PAK4	O96013	591 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	C1S	P09871	688 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	THEGL	P0DJG4	465 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ZFX	P17010	805 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	XPA	P23025	273 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	EPHA8	P29322	1005 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CDC25B	P30305	580 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GK	P32189	559 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SSR1	P43307	286 aa	Known RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TAS2R40	P59535	323 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PFN3	P60673	137 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SIM1	P81133	766 aa	Predicted RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SLC10A7	Q0GE19	358 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	FGL2	Q14314	439 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ZNF235	Q14590	738 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MESD	Q14696	234 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SHB	Q15464	509 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SPA17	Q15506	151 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SEL1L3	Q68CR1	1132 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NCBP2-AS2	Q69YL0	99 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ERAP2	Q6P179	960 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GCNT7	Q6ZNI0	430 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	KANSL1	Q7Z3B3	1105 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RHOT1	Q8IXI2	618 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RAVER1	Q8IY67	606 aa	Known RBP	12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CXorf40A	Q8TE69	158 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RHBDD1	Q8TEB9	315 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ADAMTS14	Q8WXS8	1223 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CENPT	Q96BT3	561 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	HDAC11	Q96DB2	347 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BMF	Q96LC9	184 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TBATA	Q96M53	351 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RNF157	Q96PX1	679 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CALN1	Q9BXU9	219 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BRD8	Q9H0E9	1235 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	IMPACT	Q9P2X3	320 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PPIL1	Q9Y3C6	166 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PCDHGA1	Q9Y5H4	931 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ANKRD36	A6QL64	1941 aa		12.42	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SPTY2D1-AS1	A0A0U1RR47	76 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	IGLON5	A6NGN9	336 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TMEM110-MUSTN1	A8MSY1	372 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BTNL10	A8MVZ5	291 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MATN3	O15232	486 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	INSIG1	O15503	277 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PSTPIP1	O43586	416 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ITGAV	P06756	1048 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CD48	P09326	243 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PRLR	P16471	622 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MMP12	P39900	470 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MAGEA1	P43355	309 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RGR	P47804	291 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PEX5	P50542	639 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PTK2B	Q14289	1009 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ATP13A4	Q4VNC1	1196 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CFAP58	Q5T655	872 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SLC9A4	Q6AI14	798 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	LAYN	Q6UX15	382 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ARHGAP36	Q6ZRI8	547 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	BZW1	Q7L1Q6	419 aa	Known RBP	12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RAB44	Q7Z6P3	723 aa	Predicted RBP	12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SETD7	Q8WTS6	366 aa	Known RBP	12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	UBE2Q2	Q8WVN8	375 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ATP8A1	Q9Y2Q0	1164 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	NEUROG3	Q9Y4Z2	214 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CSNK1G3	Q9Y6M4	447 aa		12.41	□□□□□ -0.42
CLTCL1-205	ENST00000538828	EPG5	Q9HCE0	2579 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SHROOM3	Q8TF72	1996 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	C3orf70	A6NLC5	250 aa	Predicted RBP	12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PSMD11	O00231	422 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MUSK	O15146	869 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MFSD11	O43934	449 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	IPO7	O95373	1038 aa	Known RBP	12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PIGN	O95427	931 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MMP13	P45452	471 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SCNN1B	P51168	640 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	HNRNPK	P61978	463 aa	Known RBP eCLIP	12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	MMRN1	Q13201	1228 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ILK	Q13418	452 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TAZ	Q16635	292 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	C11orf63	Q6NUN7	778 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828		Q6ZSR6	202 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	GAS2L3	Q86XJ1	694 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	CAMK1D	Q8IU85	385 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TP53INP2	Q8IXH6	220 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	TXLNB	Q8N3L3	684 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	SDR16C5	Q8N3Y7	309 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PQLC3	Q8N755	202 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	OR13H1	Q8NG92	308 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	RAPGEF5	Q92565	580 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	EXOC2	Q96KP1	924 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	ZNF830	Q96NB3	372 aa	Predicted RBP	12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	POLR1E	Q9GZS1	481 aa	Known RBP	12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PCDH12	Q9NPG4	1184 aa		12.4	□□□□□ -0.42
CLTCL1-205	ENST00000538828	PHTF1	Q9UMS5	762 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms