RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 RECQLP46063 649 aaPredicted RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 COPAP53621 1224 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ITKQ08881 620 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 NSUN2Q08J23 767 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLN6-202ENST00000538696 PDIA2Q13087 525 aaKnown RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 MTM1Q13496 603 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ELAVL3Q14576 367 aaKnown RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 IHHQ14623 411 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 MYLK3Q32MK0 819 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 DENND2CQ68D51 928 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ITPRIPL1Q6GPH6 555 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 CENPUQ71F23 418 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ZNF534Q76KX8 674 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 RELL1Q8IUW5 271 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLN6-202ENST00000538696 TMEM105Q8N8V8 129 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 MCUQ8NE86 351 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 OR2T3Q8NH03 318 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 OR2W6PQ8NHA6 318 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 OR8D1Q8WZ84 308 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 SERPINB12Q96P63 405 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 FAM129BQ96TA1 746 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 SEMA3CQ99985 751 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 WDR83Q9BRX9 315 aaKnown RBP17.4■□□□□ 0.38
CLN6-202ENST00000538696 PHACTR1Q9C0D0 580 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 ZDHHC6Q9H6R6 413 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 C11orf16Q9NQ32 467 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 SCUBE2Q9NQ36 999 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 NFS1Q9Y697 457 aa17.4■□□□□ 0.38
CLN6-202ENST00000538696 TCRBV21S2A2A0A5A6 115 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 FAM86C2PA6NEL3 165 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 E7ESA3 106 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 H3BQF6 201 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 ALOX15BO15296 676 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 EIF3HO15372 352 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLN6-202ENST00000538696 ACSL3O95573 720 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 MMP2P08253 660 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 LMAN1P49257 510 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 SCNN1BP51168 640 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 AP1S1P61966 158 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 SATB1Q01826 763 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 KYNUQ16719 465 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 BBS9Q3SYG4 887 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 NCEH1Q6PIU2 408 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 LRIG3Q6UXM1 1119 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 PPP1R21Q6ZMI0 780 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 FBXL6Q8N531 539 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 UHMK1Q8TAS1 419 aaKnown RBP17.39■□□□□ 0.37
CLN6-202ENST00000538696 HEPHQ9BQS7 1158 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 MLPHQ9BV36 600 aaPredicted RBP17.39■□□□□ 0.37
CLN6-202ENST00000538696 RSPH9Q9H1X1 276 aaPredicted RBP17.39■□□□□ 0.37
CLN6-202ENST00000538696 FBRSQ9HAH7 460 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 NOD2Q9HC29 1040 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 EIF2B3Q9NR50 452 aaKnown RBP17.39■□□□□ 0.37
CLN6-202ENST00000538696 HAUS2Q9NVX0 235 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 IL36AQ9UHA7 158 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 EML5Q05BV3 1969 aa17.39■□□□□ 0.37
CLN6-202ENST00000538696 ZDBF2Q9HCK1 2354 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 PIGNO95427 931 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 POP4O95707 220 aaKnown RBP17.38■□□□□ 0.37
CLN6-202ENST00000538696 SHBGP04278 402 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 GRIA1P42261 906 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 SPARCL1Q14515 664 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 RALGPS1Q5JS13 557 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 CAND1Q86VP6 1230 aaKnown RBP17.38■□□□□ 0.37
CLN6-202ENST00000538696 CACUL1Q86Y37 369 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 ANKMY2Q8IV38 441 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 ZBED8Q8IZ13 594 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 AGGF1Q8N302 714 aaeCLIP17.38■□□□□ 0.37
CLN6-202ENST00000538696 PDCD7Q8N8D1 485 aaKnown RBP17.38■□□□□ 0.37
CLN6-202ENST00000538696 GRIN3AQ8TCU5 1115 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 IMP4Q96G21 291 aaKnown RBP17.38■□□□□ 0.37
CLN6-202ENST00000538696 HHIPQ96QV1 700 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 FCRL5Q96RD9 977 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 RUFY1Q96T51 708 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 SLC25A51Q9H1U9 297 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 SLC6A17Q9H1V8 727 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 LRRC4CQ9HCJ2 640 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 MUC3AQ02505 3323 aa17.38■□□□□ 0.37
CLN6-202ENST00000538696 CACNA1IQ9P0X4 2223 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 AVILO75366 819 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 LEFTY1O75610 366 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 TTC4O95801 387 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 NUDT17P0C025 328 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 CD86P42081 329 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 MAPK8P45983 427 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 PSMD8P48556 350 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 DGKEP52429 567 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 RPS14P62263 151 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 SKOR1P84550 965 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 ZNF844Q08AG5 666 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 SLC29A2Q14542 456 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 ZNF776Q68DI1 518 aaPredicted RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 PRPF39Q86UA1 669 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 MMAAQ8IVH4 418 aaKnown RBP17.37■□□□□ 0.37
CLN6-202ENST00000538696 PDIK1LQ8N165 341 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 SPATA22Q8NHS9 363 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 PIP4K2CQ8TBX8 421 aa17.37■□□□□ 0.37
CLN6-202ENST00000538696 TADA1Q96BN2 335 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms