RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LRRC36Q1X8D7 754 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM154Q6P9G4 183 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 AAGABQ6PD74 315 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 RNF111Q6ZNA4 994 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 ARHGAP18Q8N392 663 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 PGBD5Q8N414 524 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 KDM1BQ8NB78 822 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 GTSE1Q9NYZ3 720 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 CLIC5Q9NZA1 410 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 FNIP2Q9P278 1114 aa25.09■■□□□ 1.61
RAB40C-204ENST00000538492 RGSL1A5PLK6 1076 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 DPPA5A6NC42 116 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 KCNA5P22460 613 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 YWHAQP27348 245 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 PPARGP37231 505 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 NSUN2Q08J23 767 aaKnown RBP eCLIP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 IRGCQ6NXR0 463 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 TRAF7Q6Q0C0 670 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 ATP6V0D2Q8N8Y2 350 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 CNDP1Q96KN2 507 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 BTN2A3PQ96KV6 586 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 RPRD1AQ96P16 312 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 SUDS3Q9H7L9 328 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 RNF186Q9NXI6 227 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 MARCH2Q9P0N8 246 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 KCTD3Q9Y597 815 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 SQORQ9Y6N5 450 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 OR51F1A6NGY5 319 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 TMEM189-UBE2V1I3L0A0 370 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 CCDC166P0CW27 439 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 TM4SF4P48230 202 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 ARSDP51689 593 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 HK2P52789 917 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 PLK1P53350 603 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 MTTPP55157 894 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 TAF10Q12962 218 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 MSLNQ13421 630 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 EML3Q32P44 896 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 SIRPB2Q5JXA9 342 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 RASIP1Q5U651 963 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 KIAA0408Q6ZU52 694 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 PAXIP1Q6ZW49 1069 aaPredicted RBP25.08■■□□□ 1.61
RAB40C-204ENST00000538492 VPS45Q9NRW7 570 aa25.08■■□□□ 1.61
RAB40C-204ENST00000538492 DSG1Q02413 1049 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 FAM83EQ2M2I3 478 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 RNF180Q86T96 592 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 CALML6Q8TD86 181 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 HDAC10Q969S8 669 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 MYEOVQ96EZ4 313 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 SEPT5Q99719 369 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 GPR62Q9BZJ7 368 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 SLC12A8A0AV02 714 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 SLCO1B7G3V0H7 640 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 ATP5F1P24539 256 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 LEPRP48357 1165 aaKnown RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 POLD3Q15054 466 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 DHDDSQ86SQ9 333 aa25.07■■□□□ 1.6
RAB40C-204ENST00000538492 ABT1Q9ULW3 272 aaKnown RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 MTF2Q9Y483 593 aaPredicted RBP25.07■■□□□ 1.6
RAB40C-204ENST00000538492 CYLC2Q14093 348 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 MGAT5BQ3V5L5 792 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 TECRLQ5HYJ1 363 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 CILP2Q8IUL8 1156 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 PDCD6IPQ8WUM4 868 aaKnown RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 ANKRD49Q8WVL7 239 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 ECSITQ9BQ95 431 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 CRISPLD1Q9H336 500 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 IGLV3-10A0A075B6K4 115 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 BUD23O43709 281 aaKnown RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 RAMP2O60895 175 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 ACVRL1P37023 503 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 KPNA2P52292 529 aaKnown RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 TRIP4Q15650 581 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 HECTD2Q5U5R9 776 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 PIWIL4Q7Z3Z4 852 aaKnown RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 ARRDC2Q8TBH0 407 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 RCN3Q96D15 328 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 MARCH4Q9P2E8 410 aaPredicted RBP25.06■■□□□ 1.6
RAB40C-204ENST00000538492 ADAMTS6Q9UKP5 1117 aa25.06■■□□□ 1.6
RAB40C-204ENST00000538492 NPHS1O60500 1241 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 OR1E1P30953 314 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 PRAMEP78395 509 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 CDC16Q13042 620 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 DSELQ8IZU8 1212 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 KYQ8NBH2 561 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 RP9Q8TA86 221 aaKnown RBP25.05■■□□□ 1.6
RAB40C-204ENST00000538492 PHF21BQ96EK2 531 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 RANBP9Q96S59 729 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 ZNF385DQ9H6B1 395 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 DLGAP2Q9P1A6 1054 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 HCSTQ9UBK5 93 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 SUFUQ9UMX1 484 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 CLCN5P51795 746 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 MAP3K21Q5TCX8 1036 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 AGAP9Q5VTM2 703 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 LPCAT4Q643R3 524 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 CPSF7Q8N684 471 aaKnown RBP25.05■■□□□ 1.6
RAB40C-204ENST00000538492 JADE3Q92613 823 aa25.05■■□□□ 1.6
RAB40C-204ENST00000538492 GLT1D1Q96MS3 346 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms