RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 NAB1Q13506 487 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 CYLC2Q14093 348 aaPredicted RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 INSCQ1MX18 579 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 AGKQ53H12 422 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 TIGD7Q6NT04 549 aaPredicted RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 RSPO2Q6UXX9 243 aaPredicted RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 CYP2R1Q6VVX0 501 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 MRPL10Q7Z7H8 261 aaKnown RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 MIEF2Q96C03 454 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 HAPLN3Q96S86 360 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 KIFC1Q9BW19 673 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 UBE2OQ9C0C9 1292 aaKnown RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 PLK2Q9NYY3 685 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 SUFUQ9UMX1 484 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 BPTFQ12830 3046 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 PPP6CO00743 305 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 ADAM12O43184 909 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 GPR39O43194 453 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 SLC10A3P09131 477 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 ATP6V1C1P21283 382 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 ARNTP27540 789 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 TUBB3Q13509 450 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 PFKFB4Q16877 469 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 TRMT5Q32P41 509 aaKnown RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 SIRPB2Q5JXA9 342 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 RTP2Q5QGT7 225 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 TAS2R42Q7RTR8 314 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 OR9I1Q8NGQ6 314 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 AUTS2Q8WXX7 1259 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 MUC3BQ9H195 1237 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 CCDC68Q9H2F9 335 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 MRPL46Q9H2W6 279 aaKnown RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 PIF1Q9H611 641 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 FBRSL1Q9HCM7 1045 aaKnown RBP8.77□□□□□ -1.01
UBE3B-208ENST00000538070 MKS1Q9NXB0 559 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 PCDHB8Q9UN66 801 aa8.77□□□□□ -1.01
UBE3B-208ENST00000538070 HEATR9A2RTY3 570 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 M0QZQ0 153 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TNFRSF10BO14763 440 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 PSMD3O43242 534 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 LUC7L3O95232 432 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 GJB5O95377 273 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 RALGDSQ12967 914 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 IFNEQ86WN2 208 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 LZTR1Q8N653 840 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 LPCAT1Q8NF37 534 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 PGAP3Q96FM1 320 aaPredicted RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 ZNF333Q96JL9 665 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 HBEGFQ99075 208 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SLC39A3Q9BRY0 314 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TRIM8Q9BZR9 551 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 ABCG8Q9H221 673 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 FBXO44Q9H4M3 255 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 NOL6Q9H6R4 1146 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TLE6Q9H808 572 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TLR8Q9NR97 1041 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 STX18Q9P2W9 335 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 BTRCQ9Y297 605 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 RAP2CQ9Y3L5 183 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SF3B1O75533 1304 aaKnown RBP eCLIP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 UNCXA6NJT0 531 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 F5H5T6 163 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 FGFR3P22607 806 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 PEX2P28328 305 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 HTRA3P83110 453 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 PRKAA1Q13131 559 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 PDAP1Q13442 181 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 RPS6KA2Q15349 733 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 HECTD2Q5U5R9 776 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 RNF220Q5VTB9 566 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 EPGNQ6UW88 154 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 BNIPLQ7Z465 357 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 NET1Q7Z628 596 aaPredicted RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 MYLK4Q86YV6 388 aaPredicted RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 LINC01599Q8WXQ3 324 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 GCNAQ96QF7 691 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TSPAN18Q96SJ8 248 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 IL12RB2Q99665 862 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 TRIM62Q9BVG3 475 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SEMA6AQ9H2E6 1030 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 COPS7BQ9H9Q2 264 aaPredicted RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 MID2Q9UJV3 735 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 POMPQ9Y244 141 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 VWA7Q9Y334 891 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 ARHGEF37A1IGU5 675 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 CCDC160A6NGH7 325 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SUPT3HB4E1H0 165 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 MUSKO15146 869 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SMIM24O75264 130 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SUPT3HO75486 399 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 CABYRO75952 493 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 AOC1P19801 751 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 HADHAP40939 763 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 SLC11A1P49279 550 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 HARS2P49590 506 aaKnown RBP8.76□□□□□ -1.01
UBE3B-208ENST00000538070 CDKN2DP55273 166 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 POLE2P56282 527 aa8.76□□□□□ -1.01
UBE3B-208ENST00000538070 FLOT2Q14254 428 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms