RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 A8MX80 341 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 TRAFD1O14545 582 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 RIOK3O14730 519 aaKnown RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 MAGEC1O60732 1142 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 MTA2O94776 668 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 KRT7P08729 469 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 CR2P20023 1033 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 XPAP23025 273 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 KDELR1P24390 212 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 MAGEA1P43355 309 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 GBE1Q04446 702 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 SLC10A2Q12908 348 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 PAFAH1B3Q15102 231 aaKnown RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 PDK2Q15119 407 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 ZFYVE27Q5T4F4 411 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 KYAT3Q6YP21 454 aaKnown RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 RAB44Q7Z6P3 723 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 SLC25A45Q8N413 288 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 HCAR2Q8TDS4 363 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 RFFLQ8WZ73 363 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 FAF2Q96CS3 445 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 ZNF599Q96NL3 588 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 TUBGCP5Q96RT8 1024 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 CDC6Q99741 560 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 ATP13A3Q9H7F0 1226 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 NOD2Q9HC29 1040 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 UCKL1Q9NWZ5 548 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 PCDHGC4Q9Y5F7 938 aa14.39□□□□□ -0.11
UBE3B-206ENST00000536398 TP53BP1Q12888 1972 aaPredicted RBP14.39□□□□□ -0.11
UBE3B-206ENST00000536398 WDFY3Q8IZQ1 3526 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 FRYQ5TBA9 3013 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 C3orf70A6NLC5 250 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-206ENST00000536398 A6NNZ2 444 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 FPGTO14772 594 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 TM7SF2O76062 418 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 TNNT1P13805 278 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 SERPINA4P29622 427 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 SERPINB6P35237 376 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 IGFALSP35858 605 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ARHGAP25P42331 645 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 BCL2L1Q07817 233 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 GALNT2Q10471 571 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 DNAJC3Q13217 504 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 FZD2Q14332 565 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ZNF235Q14590 738 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 IHHQ14623 411 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 GRM3Q14832 879 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 CCDC157Q569K6 752 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 CFAP58Q5T655 872 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 BRAT1Q6PJG6 821 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 MARCH9Q86YJ5 346 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 RHOT2Q8IXI1 618 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 TP53I13Q8NBR0 393 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ASB12Q8WXK4 309 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ECHDC3Q96DC8 303 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 MRFAP1L1Q96HT8 127 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ZNF670Q9BS34 389 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 GOLPH3Q9H4A6 298 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 GPR27Q9NS67 375 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 KLF15Q9UIH9 416 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 PNMA8BQ9ULN7 279 aaPredicted RBP14.38□□□□□ -0.11
UBE3B-206ENST00000536398 ATP8A1Q9Y2Q0 1164 aa14.38□□□□□ -0.11
UBE3B-206ENST00000536398 LRRD1A4D1F6 860 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TRIM38O00635 465 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 YKT6O15498 198 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TNFSF14O43557 240 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 LCA5LO95447 670 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 C6P13671 934 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 COMTP21964 271 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 DGKAP23743 735 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 MMP12P39900 470 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 GARSP41250 739 aaKnown RBP14.37□□□□□ -0.11
UBE3B-206ENST00000536398 MMP13P45452 471 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 LIG3P49916 1009 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 RENBPP51606 427 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 PFN3P60673 137 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 AP1S1P61966 158 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TRAF2Q12933 501 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 RALGDSQ12967 914 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 PDE1CQ14123 709 aaPredicted RBP14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TCEAL1Q15170 157 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 PTPRRQ15256 657 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 WSCD2Q2TBF2 565 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 MARC1Q5VT66 337 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 NYAP1Q6ZVC0 841 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 MAP7D3Q8IWC1 876 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 OXR1Q8N573 874 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.37□□□□□ -0.11
UBE3B-206ENST00000536398 TEX26Q8N6G2 289 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 ADAMTS14Q8WXS8 1223 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 CNDP2Q96KP4 475 aaKnown RBP14.37□□□□□ -0.11
UBE3B-206ENST00000536398 RNF157Q96PX1 679 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 NUDCD1Q96RS6 583 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 MGME1Q9BQP7 344 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 NT5MQ9NPB1 228 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 SCUBE2Q9NQ36 999 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 FTSJ1Q9UET6 329 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 LCMT1Q9UIC8 334 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 INTUQ9ULD6 942 aa14.37□□□□□ -0.11
UBE3B-206ENST00000536398 APOBEC2Q9Y235 224 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms