RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 THPOP40225 353 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 SCNN1GP51170 649 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 KCNC4Q03721 635 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 LGSNQ5TDP6 509 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 HM13Q8TCT9 377 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 FAR2Q96K12 515 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 SENP8Q96LD8 212 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 MTG1Q9BT17 334 aaPredicted RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 AGO3Q9H9G7 860 aaKnown RBP14.11□□□□□ -0.15
LIG1-203ENST00000536218 GDAP2Q9NXN4 497 aa14.11□□□□□ -0.15
LIG1-203ENST00000536218 ZSWIM8A7E2V4 1837 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 BCL10O95999 233 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 CKMT2P17540 419 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 SULT1E1P49888 294 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 RAB39AQ14964 217 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 PDK2Q15119 407 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 MTX3Q5HYI7 312 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 TAF2Q6P1X5 1199 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 DSELQ8IZU8 1212 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 KYQ8NBH2 561 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.1□□□□□ -0.15
LIG1-203ENST00000536218 POMCP01189 267 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 CHRNA1P02708 482 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 APRTP07741 180 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 GNAO1P09471 354 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 CEACAM7Q14002 265 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 TEDDM1Q5T9Z0 273 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 KIAA0319Q5VV43 1072 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 GET4Q7L5D6 327 aaPredicted RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 CHST15Q7LFX5 561 aaPredicted RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 TMEM102Q8N9M5 508 aaPredicted RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 TMA16Q96EY4 203 aaKnown RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 RTKNQ9BST9 563 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 UNKQ9C0B0 810 aaKnown RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 SPC25Q9HBM1 224 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.1□□□□□ -0.15
LIG1-203ENST00000536218 E2F8A0AVK6 867 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 NEMP1O14524 444 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 SPAG6O75602 509 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 EEF1DP29692 281 aaKnown RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 L1CAMP32004 1257 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 SMAD1Q15797 465 aaKnown RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 FSCBQ5H9T9 825 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 KCNT2Q6UVM3 1135 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 HFE2Q6ZVN8 426 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 SLC26A9Q7LBE3 791 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 TAS2R42Q7RTR8 314 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 NOL6Q9H6R4 1146 aaKnown RBP14.1□□□□□ -0.15
LIG1-203ENST00000536218 MARCH7Q9H992 704 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 GTF2IRD1Q9UHL9 959 aa14.1□□□□□ -0.15
LIG1-203ENST00000536218 HTTP42858 3142 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 MYBPHLA2RUH7 354 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 DPYSL4O14531 572 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 RFPL1O75677 317 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 THP07101 528 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 GOT1P17174 413 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 CD52P31358 61 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 TRPC1P48995 793 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 SLC10A2Q12908 348 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 SELENBP1Q13228 472 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 MAPK11Q15759 364 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 WDR45BQ5MNZ6 344 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 RFPL4BQ6ZWI9 263 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 DSG4Q86SJ6 1040 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 ACDQ96AP0 544 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 PGBD4Q96DM1 585 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 RHOBTB2Q9BYZ6 727 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 FRMD8P1Q9BZ68 369 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 MRPL46Q9H2W6 279 aaKnown RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 SLC27A5Q9Y2P5 690 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 TRPV2Q9Y5S1 764 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 PRSS51A0A1B0GVH4 220 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 ELNP15502 786 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 CCNA2P20248 432 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 OXA1LQ15070 435 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 XKR4Q5GH76 650 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 SYPL2Q5VXT5 272 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 MFSD14CQ5VZR4 134 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 C16orf89Q6UX73 402 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 ZBTB49Q6ZSB9 765 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 ITIH5Q86UX2 942 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 MMAAQ8IVH4 418 aaKnown RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 C3orf58Q8NDZ4 430 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 RCN3Q96D15 328 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 ALPK1Q96QP1 1244 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 KCTD15Q96SI1 283 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 NPLQ9BXD5 320 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 CEP41Q9BYV8 373 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 FAM124BQ9H5Z6 455 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 NOL11Q9H8H0 719 aaKnown RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 C20orf96Q9NUD7 363 aaPredicted RBP14.09□□□□□ -0.15
LIG1-203ENST00000536218 ADA2Q9NZK5 511 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 IFT52Q9Y366 437 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 Q9Y3F1 56 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 TLL2Q9Y6L7 1015 aa14.09□□□□□ -0.15
LIG1-203ENST00000536218 CLASP2O75122 1294 aaKnown RBP14.08□□□□□ -0.15
LIG1-203ENST00000536218 CLIC3O95833 236 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 ME2P23368 584 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 PRKCZQ05513 592 aa14.08□□□□□ -0.15
LIG1-203ENST00000536218 NFATC3Q12968 1075 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms