RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 NELFEP18615 380 aaKnown RBP18.1■□□□□ 0.49
RAB40C-203ENST00000535977 TIGD5Q53EQ6 642 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 CMC1Q7Z7K0 106 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 DDHD1Q8NEL9 900 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 ZSCAN18Q8TBC5 510 aaPredicted RBP18.1■□□□□ 0.49
RAB40C-203ENST00000535977 PTCD2Q8WV60 388 aaKnown RBP18.1■□□□□ 0.49
RAB40C-203ENST00000535977 EDEM1Q92611 657 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 AGAP2Q99490 1192 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 GPR22Q99680 433 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 NUF2Q9BZD4 464 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 CDH19Q9H159 772 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 COPS7BQ9H9Q2 264 aaPredicted RBP18.1■□□□□ 0.49
RAB40C-203ENST00000535977 MIOSQ9NXC5 875 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 RIMS3Q9UJD0 308 aa18.1■□□□□ 0.49
RAB40C-203ENST00000535977 SOBPA7XYQ1 873 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 TMX2-CTNND1H3BSU7 103 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 HSPA4LO95757 839 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 HMOX2P30519 316 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 NDST2P52849 883 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 PCID2Q5JVF3 399 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 NANOGP8Q6NSW7 305 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 NEPROQ6NW34 567 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 TAC4Q86UU9 113 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 LRRC49Q8IUZ0 686 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 VPS39Q96JC1 886 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 RHOJQ9H4E5 214 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 CATSPERBQ9H7T0 1116 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 TMEM30AQ9NV96 361 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 RNF11Q9Y3C5 154 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 MEIS3P2A8K0S8 358 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-203ENST00000535977 G3V2L1 256 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
RAB40C-203ENST00000535977 PSMC3P17980 439 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 C21orf59P57076 290 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 MRPS22P82650 360 aaKnown RBP18.09■□□□□ 0.49
RAB40C-203ENST00000535977 AGMOQ6ZNB7 445 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 FRMD7Q6ZUT3 714 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 LILRA2Q8N149 483 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 CATSPER1Q8NEC5 780 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 ADCY4Q8NFM4 1077 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 ERLEC1Q96DZ1 483 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 FCRL5Q96RD9 977 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 CHRAC1Q9NRG0 131 aa18.09■□□□□ 0.49
RAB40C-203ENST00000535977 COL4A4P53420 1690 aaPredicted RBP18.09■□□□□ 0.49
RAB40C-203ENST00000535977 IGLV3-25P01717 112 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 IGFBP6P24592 240 aaPredicted RBP18.08■□□□□ 0.49
RAB40C-203ENST00000535977 SCNN1GP51170 649 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 OLIG2Q13516 323 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 ZNF829Q3KNS6 432 aaPredicted RBP18.08■□□□□ 0.49
RAB40C-203ENST00000535977 DEPDC1Q5TB30 811 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 EPGNQ6UW88 154 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 C3orf58Q8NDZ4 430 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 STARD8Q92502 1023 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 ILKAPQ9H0C8 392 aaPredicted RBP18.08■□□□□ 0.49
RAB40C-203ENST00000535977 TPK1Q9H3S4 243 aa18.08■□□□□ 0.49
RAB40C-203ENST00000535977 IARS2Q9NSE4 1012 aaKnown RBP18.08■□□□□ 0.49
RAB40C-203ENST00000535977 DOCK3Q8IZD9 2030 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 GOLGA8TH3BQL2 631 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 CA8P35219 290 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 CSRP3P50461 194 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 EIF4EBP2Q13542 120 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-203ENST00000535977 NIPAL1Q6NVV3 410 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 MAVSQ7Z434 540 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 CLVS1Q8IUQ0 354 aaPredicted RBP18.08■□□□□ 0.48
RAB40C-203ENST00000535977 THEM5Q8N1Q8 247 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 PLD6Q8N2A8 252 aaKnown RBP18.08■□□□□ 0.48
RAB40C-203ENST00000535977 UROC1Q96N76 676 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 ABCC13Q9NSE7 274 aa18.08■□□□□ 0.48
RAB40C-203ENST00000535977 SLCO1B7G3V0H7 640 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CABYRO75952 493 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 AMHP03971 560 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 NAT1P18440 290 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 HOXC13P31276 330 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 HSPA13P48723 471 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 KPNA1P52294 538 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 GEMP55040 296 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CTBSQ01459 385 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 TAF1CQ15572 869 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 TIGD7Q6NT04 549 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 PKN3Q6P5Z2 889 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 ISOC1Q96CN7 298 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 RTP3Q9BQQ7 232 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 MRM3Q9HC36 420 aaKnown RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 OXSMQ9NWU1 459 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 MANSC4A6NHS7 340 aaPredicted RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CASTOR2A6NHX0 329 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 BDNFP23560 247 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 RABGGTBP53611 331 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 RWDD4Q6NW29 188 aaKnown RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 ZYG11AQ6WRX3 759 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 GPR180Q86V85 440 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CHERPQ8IWX8 916 aaKnown RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 ATPAF2Q8N5M1 289 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 C12orf43Q96C57 262 aaKnown RBP18.07■□□□□ 0.48
RAB40C-203ENST00000535977 TBL1YQ9BQ87 522 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CAAP1Q9H8G2 361 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 ZNF358Q9NW07 568 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 FNIP2Q9P278 1114 aa18.07■□□□□ 0.48
RAB40C-203ENST00000535977 CACNG4Q9UBN1 327 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms