RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 SLC25A45Q8N413 288 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 OR4C6Q8NH72 309 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 KLK6Q92876 244 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 TBATAQ96M53 351 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 KLHL32Q96NJ5 620 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 SNRNP25Q9BV90 132 aaKnown RBP10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CCDC86Q9H6F5 360 aaKnown RBP10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CBX8Q9HC52 389 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 LHX3Q9UBR4 397 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 UBA2Q9UBT2 640 aaPredicted RBP10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CNOT8Q9UFF9 292 aaKnown RBP10.93□□□□□ -0.66
CCDC60-202ENST00000535685 CSNK1G3Q9Y6M4 447 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 WDFY3Q8IZQ1 3526 aa10.93□□□□□ -0.66
CCDC60-202ENST00000535685 POM121BA6NF01 834 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 IGLON5A6NGN9 336 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 TMCO5BA8MYB1 307 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 EEF2KO00418 725 aaKnown RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 RAD51BO15315 384 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 PRPSAP2O60256 369 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 LRCH4O75427 683 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 CSF2P04141 144 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 GIMD1P0DJR0 217 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 TIMP2P16035 220 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 PTMSP20962 102 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 MIPP30301 263 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 GKP32189 559 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 CLDN2P57739 230 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 PFN3P60673 137 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 RHOAP61586 193 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 HNRNPKP61978 463 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 TPM4P67936 248 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 FANCCQ00597 558 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 NSUN2Q08J23 767 aaKnown RBP eCLIP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 FZD2Q14332 565 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 RFTN1Q14699 578 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 AGERQ15109 404 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 CA9Q16790 459 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 TMEM52BQ4KMG9 183 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 BOLA3Q53S33 107 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 ATXN7L2Q5T6C5 722 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 DHRS13Q6UX07 377 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 RFX8Q6ZV50 586 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 DNAAF5Q86Y56 855 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 RYBPQ8N488 228 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 LZTR1Q8N653 840 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 NIPA2Q8N8Q9 360 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 FAM181AQ8N9Y4 354 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 OR6K2Q8NGY2 324 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF592Q92610 1267 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 CENPTQ96BT3 561 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF641Q96N77 438 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 TUBGCP5Q96RT8 1024 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 PEBP4Q96S96 227 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 KCTD15Q96SI1 283 aaPredicted RBP10.92□□□□□ -0.66
CCDC60-202ENST00000535685 SLC6A16Q9GZN6 736 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 USP29Q9HBJ7 922 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 FZD3Q9NPG1 666 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 NLGN3Q9NZ94 848 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 CAPN11Q9UMQ6 739 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 LRP4O75096 1905 aa10.92□□□□□ -0.66
CCDC60-202ENST00000535685 SYCE3A1L190 88 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 CFAP69A5D8W1 941 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 TRABD2BA6NFA1 517 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 NEMP2A6NFY4 417 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 TRIM38O00635 465 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 FPGTO14772 594 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 SCAMP1O15126 338 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 SIGLEC6O43699 453 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 SKILP12757 684 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 NME1P15531 152 aaKnown RBP10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ERCC2P18074 760 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 HNF1BP35680 557 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 PAPOLAP51003 745 aaKnown RBP10.91□□□□□ -0.66
CCDC60-202ENST00000535685 UBASH3AP57075 661 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 YPEL5P62699 121 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ZBED6P86452 979 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 E2F1Q01094 437 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ELP6Q0PNE2 266 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 DNAJC3Q13217 504 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 DPYSQ14117 519 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 PIGHQ14442 188 aaPredicted RBP10.91□□□□□ -0.66
CCDC60-202ENST00000535685 DPYSL2Q16555 572 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 TMCO4Q5TGY1 634 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 BRAT1Q6PJG6 821 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 TTC7BQ86TV6 843 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ARHGAP12Q8IWW6 846 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF653Q96CK0 615 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ZNF599Q96NL3 588 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 MYOCQ99972 504 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 DUSP23Q9BVJ7 150 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 C1QTNF7Q9BXJ2 289 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 CALN1Q9BXU9 219 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 TRIM7Q9C029 511 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 SLC39A8Q9C0K1 460 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 SUV39H2Q9H5I1 410 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 DHX35Q9H5Z1 703 aaKnown RBP10.91□□□□□ -0.66
CCDC60-202ENST00000535685 GPATCH2LQ9NWQ4 482 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 KIF26BQ2KJY2 2108 aa10.91□□□□□ -0.66
CCDC60-202ENST00000535685 ITPR1Q14643 2758 aa10.9□□□□□ -0.66
CCDC60-202ENST00000535685 J3KR12 359 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms