RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 TAF11Q15544 211 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 ESCO2Q56NI9 601 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 XKR9Q5GH70 373 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 SERTAD4-AS1Q5TG53 156 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 CYP26C1Q6V0L0 522 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 CPXCR1Q8N123 301 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 PARP16Q8N5Y8 322 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 ARRDC2Q8TBH0 407 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 MAELQ96JY0 434 aaKnown RBP5.25□□□□□ -1.57
PRKDC-205ENST00000535375 SIN3AQ96ST3 1273 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 PSMD1Q99460 953 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 C1QTNF4Q9BXJ3 329 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 NUF2Q9BZD4 464 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 GPR63Q9BZJ6 419 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 INTS2Q9H0H0 1204 aaKnown RBP5.25□□□□□ -1.57
PRKDC-205ENST00000535375 SNTG1Q9NSN8 517 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 KIAA1456Q9P272 454 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 CARD8Q9Y2G2 431 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 NFS1Q9Y697 457 aa5.25□□□□□ -1.57
PRKDC-205ENST00000535375 IGLV5-37A0A075B6J1 123 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 CBY3A6NI87 242 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 HSPB2A8KAH6 182 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 NDUFB4O95168 129 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 CNTFP26441 200 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 CXCR3P49682 368 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 CCR5P51681 352 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 EFNB1P98172 346 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 SF3B4Q15427 424 aaKnown RBP eCLIP5.24□□□□□ -1.57
PRKDC-205ENST00000535375 HSPB2Q16082 182 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 NAA35Q5VZE5 725 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 C9orf57Q5W0N0 161 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 NEXN-AS1Q8NBZ9 246 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 C11orf65Q8NCR3 313 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 IGSF21Q96ID5 467 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 OR1F2PQ96R84 312 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 RETREG1Q9H6L5 497 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 SMYD2Q9NRG4 433 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 PLSCR4Q9NRQ2 329 aa5.24□□□□□ -1.57
PRKDC-205ENST00000535375 BEX4Q9NWD9 120 aaPredicted RBP5.24□□□□□ -1.57
PRKDC-205ENST00000535375 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.24□□□□□ -1.57
PRKDC-205ENST00000535375 LOC102724159A0A0B4J2E5 919 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 hDV102S1A0JD36 115 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 SMTNL1A8MU46 457 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 J3KR12 359 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 PPP1R3DO95685 299 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 CD58P19256 250 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 POU3F1Q03052 451 aaPredicted RBP5.23□□□□□ -1.57
PRKDC-205ENST00000535375 TLE2Q04725 743 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 GRSF1Q12849 480 aaKnown RBP eCLIP5.23□□□□□ -1.57
PRKDC-205ENST00000535375 COASYQ13057 564 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 MYBPHQ13203 477 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 TRPC3Q13507 836 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 NEDD9Q14511 834 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 PWP2Q15269 919 aaKnown RBP5.23□□□□□ -1.57
PRKDC-205ENST00000535375 SOWAHAQ2M3V2 549 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ZNF667Q5HYK9 610 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 CPLX2Q6PUV4 134 aaKnown RBP5.23□□□□□ -1.57
PRKDC-205ENST00000535375 CCDC129Q6ZRS4 1044 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 RRM2BQ7LG56 351 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ZC3HC1Q86WB0 502 aaKnown RBP5.23□□□□□ -1.57
PRKDC-205ENST00000535375 NR2C2APQ86WQ0 139 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ZCCHC10Q8TBK6 192 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ELP4Q96EB1 424 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ADGRG7Q96K78 797 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 ZNF570Q96NI8 536 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 BBS4Q96RK4 519 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 CHMP4AQ9BY43 222 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 IL25Q9H293 177 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 TMEM160Q9NX00 188 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 LUZP4Q9P127 313 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 HCN3Q9P1Z3 774 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 CTNNAL1Q9UBT7 734 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 MALT1Q9UDY8 824 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 SNX9Q9Y5X1 595 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 A3GALT2U3KPV4 340 aa5.23□□□□□ -1.57
PRKDC-205ENST00000535375 URODP06132 367 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 GALTP07902 379 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 GPTP24298 496 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 PIGAP37287 484 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 MAPK9P45984 424 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 EEF1A2Q05639 463 aaKnown RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 FOXD4Q12950 439 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 CAMK1Q14012 370 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 DHX34Q14147 1143 aaKnown RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 CALCRLQ16602 461 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 ZNF766Q5HY98 468 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 TMEM81Q6P7N7 255 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 RHBDF2Q6PJF5 856 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 TMTC1Q8IUR5 882 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 PGBD5Q8N414 524 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 MYRIPQ8NFW9 859 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 LILRB1Q8NHL6 650 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 MORC4Q8TE76 937 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 MXRA8Q9BRK3 442 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 VPS33BQ9H267 617 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 TTYH1Q9H313 450 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 RRN3Q9NYV6 651 aa5.22□□□□□ -1.57
PRKDC-205ENST00000535375 TRIP12Q14669 1992 aaPredicted RBP5.22□□□□□ -1.57
PRKDC-205ENST00000535375 A0A0U1RQF3 1178 aa5.21□□□□□ -1.58
PRKDC-205ENST00000535375 GAGE10A6NGK3 116 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms