RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 MACROD2A1Z1Q3 448 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 TTC24A2A3L6 582 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 FPGTO14772 594 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 MUSKO15146 869 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 MMP20O60882 483 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PAK4O96013 591 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PTMAP06454 111 aaKnown RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 KRT10P13645 584 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CCNB1P14635 433 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CA4P22748 312 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CTSKP43235 329 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CCT8P50990 548 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 NXPH1P58417 271 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 MAXP61244 160 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 AP1B1Q10567 949 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 RALGPS1Q5JS13 557 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PSAPL1Q6NUJ1 521 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 KATNAL2Q8IYT4 538 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 OXR1Q8N573 874 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 DEFB124Q8NES8 71 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 FAM174AQ8TBP5 190 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 TSGA13Q96PP4 275 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 NUDCD1Q96RS6 583 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 MGME1Q9BQP7 344 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 IL21RQ9HBE5 538 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 RBM22Q9NW64 420 aaKnown RBP eCLIP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 DTLQ9NZJ0 730 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 SEPT10Q9P0V9 454 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 GGT7Q9UJ14 662 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 ZFR2Q9UPR6 939 aaKnown RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 CA5BQ9Y2D0 317 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 FNDC3AQ9Y2H6 1198 aaKnown RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 ATP8A1Q9Y2Q0 1164 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 REXO2Q9Y3B8 237 aaKnown RBP13.5□□□□□ -0.25
CAPN1-227ENST00000533909 PCDH15Q96QU1 1955 aa13.5□□□□□ -0.25
CAPN1-227ENST00000533909 ASCC3Q8N3C0 2202 aaKnown RBP13.49□□□□□ -0.25
CAPN1-227ENST00000533909 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-227ENST00000533909 A6NNZ2 444 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 H0Y8X5 98 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 KCNK3O14649 394 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 WNT9AO14904 365 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 AREL1O15033 823 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 YKT6O15498 198 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 PJA2O43164 708 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 LZTS3O60299 673 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-227ENST00000533909 SOCS5O75159 536 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 GJB3O75712 270 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 TM7SF2O76062 418 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 KCNK5O95279 499 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 PEX11BO96011 259 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 WNT1P04628 370 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 ZNF883P0CG24 379 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 CSRP1P21291 193 aaKnown RBP13.49□□□□□ -0.25
CAPN1-227ENST00000533909 CES1P23141 567 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 NR2C2P49116 596 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 FOXK2Q01167 660 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 BNC1Q01954 994 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 LLGL1Q15334 1064 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 TFDP3Q5H9I0 405 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 SPOCD1Q6ZMY3 1216 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 TMEM139Q8IV31 216 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 NDUFAF2Q8N183 169 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 LGMNQ99538 433 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 ELF4Q99607 663 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-227ENST00000533909 SEMA3CQ99985 751 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 C1QTNF2Q9BXJ5 285 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 BRD8Q9H0E9 1235 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 NOD2Q9HC29 1040 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 PCDHGC4Q9Y5F7 938 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 DUSP10Q9Y6W6 482 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
CAPN1-227ENST00000533909 A0A1W2PR77 199 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
CAPN1-227ENST00000533909 TM4SF5O14894 197 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CST8O60676 142 aa13.48□□□□□ -0.25
CAPN1-227ENST00000533909 CPP00450 1065 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms