RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 SOCS5O75159 536 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 METTL18O95568 372 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 GOLGA6DP0CG33 693 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 CTPS1P17812 591 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 DRD3P35462 400 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 P2RY2P41231 377 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 WNT3AP56704 352 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 FAM193AP78312 1265 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 BASP1P80723 227 aaKnown RBP17.6■□□□□ 0.41
NXF1-216ENST00000533499 MRPS25P82663 173 aaKnown RBP17.6■□□□□ 0.41
NXF1-216ENST00000533499 SRSF5Q13243 272 aaKnown RBP17.6■□□□□ 0.41
NXF1-216ENST00000533499 GALNT3Q14435 633 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 SPARCL1Q14515 664 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 IHHQ14623 411 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 PARP6Q2NL67 630 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 ALG1LQ6GMV1 187 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 CEP68Q76N32 757 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 KBTBD6Q86V97 674 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 WDR5BQ86VZ2 330 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 SLC25A41Q8N5S1 370 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 DEFB119Q8N690 84 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 RTP4Q96DX8 246 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 TOE1Q96GM8 510 aaKnown RBP17.6■□□□□ 0.41
NXF1-216ENST00000533499 FICDQ9BVA6 458 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 BTBD1Q9H0C5 482 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 PCDH9Q9HC56 1237 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 GOLGA6AQ9NYA3 693 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 MRFAP1Q9Y605 127 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 NUMA1Q14980 2115 aa17.6■□□□□ 0.41
NXF1-216ENST00000533499 ZNF318Q5VUA4 2279 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 UPK3BL1B0FP48 263 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 UPK3BL2E5RIL1 263 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 PCDH8O95206 1070 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 PGLSO95336 258 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 PDHA1P08559 390 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 TDGF1P13385 188 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 ADRB3P13945 408 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 TIMP2P16035 220 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 ITIH2P19823 946 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 CD6P30203 668 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 OXTRP30559 389 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 HOXA6P31267 233 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 NUBP1P53384 320 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 POLR2LP62875 67 aaKnown RBP17.59■□□□□ 0.41
NXF1-216ENST00000533499 DR1Q01658 176 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 GPS1Q13098 491 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 TUBB2AQ13885 445 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 BRAT1Q6PJG6 821 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 USP30Q70CQ3 517 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 ZSWIM9Q86XI8 627 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 MNS1Q8NEH6 495 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 LRRC45Q96CN5 670 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 RUNDC3BQ96NL0 473 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 APOL2Q9BQE5 337 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 MLPHQ9BV36 600 aaPredicted RBP17.59■□□□□ 0.41
NXF1-216ENST00000533499 TUBB2BQ9BVA1 445 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 GPR174Q9BXC1 333 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 TDRD1Q9BXT4 1180 aaKnown RBP17.59■□□□□ 0.41
NXF1-216ENST00000533499 HDAC8Q9BY41 377 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 ZSCAN32Q9NX65 697 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 DKK3Q9UBP4 350 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 ASIC3Q9UHC3 531 aa17.59■□□□□ 0.41
NXF1-216ENST00000533499 AAR2Q9Y312 384 aaKnown RBP17.59■□□□□ 0.41
NXF1-216ENST00000533499 TBC1D3DA0A087WVF3 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3IA0A087WXS9 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3EA0A087X179 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3KA0A087X1G2 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 IGHV1OR15-9A0A0B4J2B8 117 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3FA6NER0 549 aaPredicted RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3LB9A6J9 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 RPP40O75818 363 aaKnown RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3HP0C7X1 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 ACSL1P33121 698 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 FDFT1P37268 417 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 ABL2P42684 1182 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 CDK18Q07002 472 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 MPP3Q13368 585 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 UGP2Q16851 508 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 MAP7D1Q3KQU3 841 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 PIP5KL1Q5T9C9 394 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 AGBL4Q5VU57 503 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3GQ6DHY5 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3CQ6IPX1 549 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 ERAP2Q6P179 960 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 TBC1D3Q8IZP1 549 aaPredicted RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 NDUFAF2Q8N183 169 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 PDCD7Q8N8D1 485 aaKnown RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 PPP1R2P1Q96PQ5 205 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 ADGRE3Q9BY15 652 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 FAM126AQ9BYI3 521 aaPredicted RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 ETNK1Q9HBU6 452 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 VPS45Q9NRW7 570 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 USP36Q9P275 1121 aaKnown RBP17.58■□□□□ 0.4
NXF1-216ENST00000533499 FZD4Q9ULV1 537 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 ITM2BQ9Y287 266 aa17.58■□□□□ 0.4
NXF1-216ENST00000533499 CCDC163A0A0D9SF12 145 aa17.57■□□□□ 0.4
NXF1-216ENST00000533499 A0A1W2PQ67 120 aa17.57■□□□□ 0.4
NXF1-216ENST00000533499 CTAGE15A4D2H0 777 aa17.57■□□□□ 0.4
NXF1-216ENST00000533499 LRRC72A6NJI9 287 aa17.57■□□□□ 0.4
NXF1-216ENST00000533499 GOLGA8CPA6NN73 597 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms