RNA–Protein interactions for RNA: ENST00000533451.1

UBASH3B-208, Transcript of ubiquitin associated and SH3 domain containing B, humanhuman

TSL 2

Gene UBASH3B, Length 1,032 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3B-208ENST00000533451 EBF2Q9HAK2 575 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 HAUS2Q9NVX0 235 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 ANKRD6Q9Y2G4 727 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 FADS3Q9Y5Q0 445 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 SNX11Q9Y5W9 270 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 DUSP10Q9Y6W6 482 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 CABIN1Q9Y6J0 2220 aa11.59□□□□□ -0.55
UBASH3B-208ENST00000533451 DMDP11532 3685 aa11.58□□□□□ -0.55
UBASH3B-208ENST00000533451 UPK3BL1B0FP48 263 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 UPK3BL2E5RIL1 263 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 PRAMEF26H0Y7S4 382 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 CDX4O14627 284 aaPredicted RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 KCNK3O14649 394 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 MUSKO15146 869 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 LATO43561 262 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 TSPAN6O43657 245 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 PRKCGP05129 697 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 ZFXP17010 805 aaPredicted RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 NUDT1P36639 197 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 MARCKSL1P49006 195 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 NOVA1P51513 510 aaKnown RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 FAM193AP78312 1265 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 IL9RQ01113 521 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 SEMG2Q02383 582 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 TFDP2Q14188 446 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 HLA-BQ31612 363 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 NEK5Q6P3R8 708 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 MFSD7Q6UXD7 560 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 NPNTQ6UXI9 565 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 SPOCD1Q6ZMY3 1216 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 PTAR1Q7Z6K3 402 aaPredicted RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 LRRC49Q8IUZ0 686 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 TMEM139Q8IV31 216 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 C1orf216Q8TAB5 229 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 KIAA1524Q8TCG1 905 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 FAM131CQ96AQ9 280 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 HAUS1Q96CS2 278 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 FAF2Q96CS3 445 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 RBM41Q96IZ5 413 aaKnown RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 PSKH2Q96QS6 385 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 CPEB1Q9BZB8 566 aaKnown RBP11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 LACRTQ9GZZ8 138 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 SUV39H2Q9H5I1 410 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 GRPEL1Q9HAV7 217 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 DLL3Q9NYJ7 618 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 TRIM10Q9UDY6 481 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 SALL4Q9UJQ4 1053 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 DMTF1Q9Y222 760 aa11.58□□□□□ -0.56
UBASH3B-208ENST00000533451 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 TDRD6O60522 2096 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 IGLON5A6NGN9 336 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 C3orf70A6NLC5 250 aaPredicted RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 A8MX80 341 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 WNT9AO14904 365 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PPP1R12AO14974 1030 aaPredicted RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 AP1G1O43747 822 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 CST8O60676 142 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 MMP20O60882 483 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ZRANB2O95218 330 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 KRT10P13645 584 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 TIMP2P16035 220 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ITIH2P19823 946 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 HNRNPA2B1P22626 353 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 CSNK1DP48730 415 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ELP6Q0PNE2 266 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PDK1Q15118 436 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ZNF284Q2VY69 593 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PPM1JQ5JR12 505 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PRAMEF14Q5SWL7 426 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 BRAT1Q6PJG6 821 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 CCDC13Q8IYE1 715 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 KATNAL2Q8IYT4 538 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 RCOR2Q8IZ40 523 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PGBD5Q8N414 524 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PLD5Q8N7P1 536 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 CCDC112Q8NEF3 446 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 DEFB124Q8NES8 71 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 SETD7Q8WTS6 366 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ANP32BQ92688 251 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 KRT35Q92764 455 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 KLHDC7BQ96G42 594 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 CALR3Q96L12 384 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ZNF641Q96N77 438 aaPredicted RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 LGMNQ99538 433 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 ORAI3Q9BRQ5 295 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 HEMGNQ9BXL5 484 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 SLC17A9Q9BYT1 436 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 POLR1EQ9GZS1 481 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 IL21RQ9HBE5 538 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 NOD2Q9HC29 1040 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PCDH12Q9NPG4 1184 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 GDF3Q9NR23 364 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 RBM22Q9NW64 420 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 DTLQ9NZJ0 730 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 DKK3Q9UBP4 350 aa11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 FNDC3AQ9Y2H6 1198 aaKnown RBP11.57□□□□□ -0.56
UBASH3B-208ENST00000533451 PCDHGC4Q9Y5F7 938 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms