RNA–Protein interactions for RNA: ENST00000533370.1

TGFBR3-211, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-211ENST00000533370 NXPE3Q969Y0 559 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 EXOC2Q96KP1 924 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 CDX2Q99626 313 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 RPP25Q9BUL9 199 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 CPEB1Q9BZB8 566 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 STMN4Q9H169 189 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 UBE2ZQ9H832 354 aaPredicted RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 PLAC1Q9HBJ0 212 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 CHRAC1Q9NRG0 131 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 VPS18Q9P253 973 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 SLCO3A1Q9UIG8 710 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 RPL26L1Q9UNX3 145 aaKnown RBP12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 PLA2G4CQ9UP65 541 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 RPS6KL1Q9Y6S9 549 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 FAM169AQ9Y6X4 670 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 SHROOM3Q8TF72 1996 aa12.38□□□□□ -0.43
TGFBR3-211ENST00000533370 HEATR9A2RTY3 570 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CDH16O75309 829 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 PAPSS2O95340 614 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 PRLP01236 227 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 KCNA5P22460 613 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 GJA4P35212 333 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CHRNA4P43681 627 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 STK19P49842 368 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 ST8SIA6P61647 398 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 RAD51Q06609 339 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 BCL2L1Q07817 233 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 MSLNQ13421 630 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 GRM3Q14832 879 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CRYMQ14894 314 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 E2F5Q15329 346 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CCDC85BQ15834 202 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 C22orf39Q6P5X5 142 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 C12orf40Q86WS4 652 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CNPY4Q8N129 248 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 KRT222Q8N1A0 295 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 RIBC1Q8N443 379 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 PPHLN1Q8NEY8 458 aaKnown RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 MYLIPQ8WY64 445 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 MRGPRX3Q96LB0 322 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 NSMCE3Q96MG7 304 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 TUBGCP5Q96RT8 1024 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 TDRD1Q9BXT4 1180 aaKnown RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CIPCQ9C0C6 399 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 TNKS2Q9H2K2 1166 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 ATP13A3Q9H7F0 1226 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 BRD9Q9H8M2 597 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 GTSE1Q9NYZ3 720 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 HECAQ9UBI9 543 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 PRKAG3Q9UGI9 489 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 EVLQ9UI08 416 aaPredicted RBP12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 LHX6Q9UPM6 363 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 CHKBQ9Y259 395 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 TCAF1Q9Y4C2 921 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 PCDHGC4Q9Y5F7 938 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 NUMBLQ9Y6R0 609 aa12.37□□□□□ -0.43
TGFBR3-211ENST00000533370 TBC1D3BA6NDS4 549 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 MROH6A6NGR9 719 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 FAM159BA6NKW6 160 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 HMGB1P1B2RPK0 211 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 WASH3PC4AMC7 463 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 POC1B-GALNT4F8VUJ3 575 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ARNTLO00327 626 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 RGS16O15492 202 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 MBTPS2O43462 519 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 HTRA2O43464 458 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 FZD6O60353 706 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 SOCS5O75159 536 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 OPRD1P41143 372 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 GRIA2P42262 883 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 MSH2P43246 934 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 RECQLP46063 649 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 NAB1Q13506 487 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 POU6F1Q14863 301 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 SKIV2LQ15477 1246 aaKnown RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 LONRF1Q17RB8 773 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ARMC12Q5T9G4 340 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 LRRC6Q86X45 466 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 PHTF2Q8N3S3 785 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 RYBPQ8N488 228 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 BRSK1Q8TDC3 778 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 CSGALNACT1Q8TDX6 532 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 EPS8L3Q8TE67 593 aaKnown RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 FRS2Q8WU20 508 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 UCMAQ8WVF2 138 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 HLA-CQ95604 372 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ARL8AQ96BM9 186 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ZBTB9Q96C00 473 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 RMDN1Q96DB5 314 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ATP6V1G3Q96LB4 118 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 ZNF641Q96N77 438 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 FCRL3Q96P31 734 aaPredicted RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 SRPK1Q96SB4 655 aaKnown RBP12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 DHRS4Q9BTZ2 278 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 TM6SF2Q9BZW4 377 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 CENPHQ9H3R5 247 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 TRPV5Q9NQA5 729 aa12.36□□□□□ -0.43
TGFBR3-211ENST00000533370 BCCIPQ9P287 314 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms