RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 ZNF460Q14592 562 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 PKN3Q6P5Z2 889 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 SLC26A9Q7LBE3 791 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ZNF572Q7Z3I7 529 aaPredicted RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.33□□□□□ -0.44
BDNF-218ENST00000533246 ULK2Q8IYT8 1036 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 HPS1Q92902 700 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 NSMCE3Q96MG7 304 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 ROGDIQ9GZN7 287 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 PCDH12Q9NPG4 1184 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 EGFL7Q9UHF1 273 aa12.33□□□□□ -0.44
BDNF-218ENST00000533246 EIF3LQ9Y262 564 aaKnown RBP12.33□□□□□ -0.44
BDNF-218ENST00000533246 SMIM31A0A1B0GVY4 71 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 H7C4K7 107 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 TK2O00142 265 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 TOP3BO95985 862 aaKnown RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 ASLP04424 464 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ABCB1P08183 1280 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 COX4I1P13073 169 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CTPS1P17812 591 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SKIV2L2P42285 1042 aaKnown RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 CHRNA4P43681 627 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SH3D19Q5HYK7 790 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 RETSATQ6NUM9 610 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 STRADAQ7RTN6 431 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 STK32CQ86UX6 486 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 HPS6Q86YV9 775 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CDYL2Q8N8U2 506 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 OXCT2Q9BYC2 517 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 RNF208Q9H0X6 261 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 GNG14A0A1W2PPG7 69 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 HNRNPCL2B2RXH8 293 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 C5orf58C9J3I9 102 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PDLIM1O00151 329 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 LZTS3O60299 673 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 TBC1D4O60343 1298 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 LRPAP1P30533 357 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SERPINB1P30740 379 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PBX3P40426 434 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 GRIA3P42263 894 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CXCR3P49682 368 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CCNG1P51959 295 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 WNT7BP56706 349 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 STARD3Q14849 445 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SMU1Q2TAY7 513 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ZNF618Q5T7W0 954 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CACHD1Q5VU97 1274 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 UGT3A1Q6NUS8 523 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ADGRD1Q6QNK2 874 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CIR1Q86X95 450 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 DHFR2Q86XF0 187 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SLC22A9Q8IVM8 553 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 C12orf50Q8NA57 414 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 SMAD5Q99717 465 aaKnown RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 PLGRKTQ9HBL7 147 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 VPS45Q9NRW7 570 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 KANSL3Q9P2N6 904 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ATPIF1Q9UII2 106 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PCDHB9Q9Y5E1 797 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 RGPD5Q99666 1765 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 KANSL1LA0AUZ9 987 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ZNF839A8K0R7 811 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CXorf49A8MYA2 514 aaPredicted RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 KPNA6O60684 536 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 RGS20O76081 388 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PRIM2P49643 509 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 MPP1Q00013 466 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 TAF10Q12962 218 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CDC16Q13042 620 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 CCL14Q16627 93 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 METTL21CQ5VZV1 264 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 ESRP1Q6NXG1 681 aaKnown RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 P3H2Q8IVL5 708 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SLC35B2Q8TB61 432 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 JADE3Q92613 823 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 APBB2Q92870 758 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 NXNL1Q96CM4 212 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PIWIL1Q96J94 861 aaKnown RBP12.32□□□□□ -0.44
BDNF-218ENST00000533246 CITED4Q96RK1 184 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 FIZ1Q96SL8 496 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SYT17Q9BSW7 474 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 C1orf50Q9BV19 199 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SH3BP4Q9P0V3 963 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 SEPT3Q9UH03 358 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 DAPK2Q9UIK4 370 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 COQ6Q9Y2Z9 468 aa12.32□□□□□ -0.44
BDNF-218ENST00000533246 PTGES3LE9PB15 166 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 H2AFYO75367 372 aaKnown RBP12.31□□□□□ -0.44
BDNF-218ENST00000533246 SEC22BO75396 215 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 FYNP06241 537 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 VAC14Q08AM6 782 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 PTP4A2Q12974 167 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 ITGADQ13349 1161 aa12.31□□□□□ -0.44
BDNF-218ENST00000533246 AARS2Q5JTZ9 985 aaKnown RBP12.31□□□□□ -0.44
BDNF-218ENST00000533246 C1orf220Q5T0J3 134 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms