RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 KCNK3O14649 394 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 RNGTTO60942 597 aaKnown RBP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 SOCS5O75159 536 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 MMP2P08253 660 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 ITIH2P19823 946 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 PTPN3P26045 913 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 CD27P26842 260 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 DPP6P42658 865 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 ATP5OP48047 213 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 SUOXP51687 545 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 EIF3EP60228 445 aaKnown RBP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 WASHC5Q12768 1159 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 CSRP2Q16527 193 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 UGP2Q16851 508 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF284Q2VY69 593 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 TEX44Q53QW1 395 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 SLC45A4Q5BKX6 768 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 ZNF569Q5MCW4 686 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 HORMAD1Q86X24 394 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 TEKT5Q96M29 485 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 PCDH12Q9NPG4 1184 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 VPS45Q9NRW7 570 aa12.09□□□□□ -0.47
SSBP3-214ENST00000533209 TPX2Q9ULW0 747 aaKnown RBP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 R3HDM2Q9Y2K5 976 aaKnown RBP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSBP3-214ENST00000533209 A0A1W2PQU0 124 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 GOLGA6L9A6NEM1 432 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 ENC1O14682 589 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 MTSS1O43312 755 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 TSPAN6O43657 245 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 PCDH8O95206 1070 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 RBP3P10745 1247 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 RBL1P28749 1068 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 MAT2AP31153 395 aaKnown RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 CD68P34810 354 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SKOR1P84550 965 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SF3A2Q15428 464 aaKnown RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 DUOXA1Q1HG43 343 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 CFAP58Q5T655 872 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SEL1L3Q68CR1 1132 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 TCEAL6Q6IPX3 200 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 PRPF39Q86UA1 669 aaKnown RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SLC13A5Q86YT5 568 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SLC35F6Q8N357 371 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 ZCCHC9Q8N567 271 aaKnown RBP12.08□□□□□ -0.48
SSBP3-214ENST00000533209 TTC13Q8NBP0 860 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 CEP76Q8TAP6 659 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 FEM1CQ96JP0 617 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 AGAP3Q96P47 875 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 MIR1-1HGQ9H1L0 117 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 TM9SF3Q9HD45 589 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 HAUS2Q9NVX0 235 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SUSD2Q9UGT4 822 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 JRKLQ9Y4A0 524 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 PCDHB9Q9Y5E1 797 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 RAI2Q9Y5P3 530 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 SHROOM3Q8TF72 1996 aa12.08□□□□□ -0.48
SSBP3-214ENST00000533209 LAMA1P25391 3075 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 TNRC6BQ9UPQ9 1833 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 A0A1B0GTW7 788 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 A0A1W2PQ67 120 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 NEMP1O14524 444 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 WNT9AO14904 365 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 BCAT2O15382 392 aaPredicted RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 FZD6O60353 706 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PGLSO95336 258 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 CPP00450 1065 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PRLP01236 227 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PRKCGP05129 697 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PDHA1P08559 390 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 SERPINF2P08697 491 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 GNSP15586 552 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PRLRP16471 622 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 XPAP23025 273 aaPredicted RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 NUDT1P36639 197 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 CD86P42081 329 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 RPS21P63220 83 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 IRX4P78413 519 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 ELP6Q0PNE2 266 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 FGL2Q14314 439 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 TMEM52BQ4KMG9 183 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 TRIM61Q5EBN2 209 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 KIAA1161Q6NSJ0 714 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 DARS2Q6PI48 645 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 SLC23A3Q6PIS1 610 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 RABEPKQ7Z6M1 372 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 ADAT2Q7Z6V5 191 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 ZNF567Q8N184 647 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 GPR161Q8N6U8 529 aaKnown RBP12.07□□□□□ -0.48
SSBP3-214ENST00000533209 SLC35B2Q8TB61 432 aa12.07□□□□□ -0.48
SSBP3-214ENST00000533209 PDCD6IPQ8WUM4 868 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms