RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 TUBB4AP04350 444 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 SERPINA4P29622 427 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 HSPA9P38646 679 aaKnown RBP16.82■□□□□ 0.28
PKP3-209ENST00000533069 RABIFP47224 123 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 AP1S1P61966 158 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 KIF5AQ12840 1032 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 FGL2Q14314 439 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 LBRQ14739 615 aaKnown RBP16.82■□□□□ 0.28
PKP3-209ENST00000533069 ARHGAP36Q6ZRI8 547 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 SRLQ86TD4 932 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 GATAD2AQ86YP4 633 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 LRRC49Q8IUZ0 686 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 ATPAF2Q8N5M1 289 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 TSEN2Q8NCE0 465 aaKnown RBP16.82■□□□□ 0.28
PKP3-209ENST00000533069 OR13H1Q8NG92 308 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 CXorf40AQ8TE69 158 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 IFT43Q96FT9 208 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 CALN1Q9BXU9 219 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 SPTLC3Q9NUV7 552 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 ETNK2Q9NVF9 386 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 GGT7Q9UJ14 662 aa16.82■□□□□ 0.28
PKP3-209ENST00000533069 PJA2O43164 708 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 TIMP2P16035 220 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 CLDN2P57739 230 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 ZNF235Q14590 738 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 PDK2Q15119 407 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 IFI16Q16666 785 aaKnown RBP16.81■□□□□ 0.28
PKP3-209ENST00000533069 UGP2Q16851 508 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 TMEM52BQ4KMG9 183 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 ERAP2Q6P179 960 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 Q6ZSR6 202 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 PTAR1Q7Z6K3 402 aaPredicted RBP16.81■□□□□ 0.28
PKP3-209ENST00000533069 MAP7D3Q8IWC1 876 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 RHOT2Q8IXI1 618 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 BBS5Q8N3I7 341 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 KCTD6Q8NC69 237 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 NSMCE1Q8WV22 266 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 KLF6Q99612 283 aaPredicted RBP16.81■□□□□ 0.28
PKP3-209ENST00000533069 ZNF670Q9BS34 389 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 GPR27Q9NS67 375 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 PYCARDQ9ULZ3 195 aa16.81■□□□□ 0.28
PKP3-209ENST00000533069 A0A0A6YYK5 440 aaPredicted RBP16.8■□□□□ 0.28
PKP3-209ENST00000533069 FAM221BA6H8Z2 402 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 RAD51BO15315 384 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 BUB1BO60566 1050 aaPredicted RBP16.8■□□□□ 0.28
PKP3-209ENST00000533069 TM7SF2O76062 418 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 DKK1O94907 266 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 TOP3BO95985 862 aaKnown RBP16.8■□□□□ 0.28
PKP3-209ENST00000533069 ATXN1LP0C7T5 689 aaKnown RBP16.8■□□□□ 0.28
PKP3-209ENST00000533069 SPINK2P20155 84 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 IL4RP24394 825 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 GJC1P36383 396 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 ARHGAP25P42331 645 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 RGRP47804 291 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 ARSEP51690 589 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 BCL2L1Q07817 233 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 DPYSL3Q14195 570 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 LRRC73Q5JTD7 316 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 KANSL1Q7Z3B3 1105 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 CAMK1DQ8IU85 385 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 TP53INP2Q8IXH6 220 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 SLC22A18ASQ8N1D0 253 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 CHCHD4Q8N4Q1 142 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 RNF10Q8N5U6 811 aaKnown RBP16.8■□□□□ 0.28
PKP3-209ENST00000533069 BMFQ96LC9 184 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 TOR4AQ9NXH8 423 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 MSRB2Q9Y3D2 182 aa16.8■□□□□ 0.28
PKP3-209ENST00000533069 CHD8Q9HCK8 2581 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.79■□□□□ 0.28
PKP3-209ENST00000533069 A0A1W2PQ67 120 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 POM121BA6NF01 834 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 TOR1BO14657 336 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 MUSKO15146 869 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 MAFKO60675 156 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 MMP20O60882 483 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 MTA2O94776 668 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 PEX11BO96011 259 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 CD48P09326 243 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 SCNN1BP51168 640 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 POLR2LP62875 67 aaKnown RBP16.79■□□□□ 0.28
PKP3-209ENST00000533069 SLC10A7Q0GE19 358 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 BNIP3Q12983 259 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 TCEAL1Q15170 157 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 RALGPS1Q5JS13 557 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 SLCO6A1Q86UG4 719 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 EID2Q8N6I1 236 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 PNPLA1Q8N8W4 532 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 ACRBPQ8NEB7 543 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 SLC35G2Q8TBE7 412 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 RFFLQ8WZ73 363 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 SPOCK2Q92563 424 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 ECHDC3Q96DC8 303 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 CNDP2Q96KP4 475 aaKnown RBP16.79■□□□□ 0.28
PKP3-209ENST00000533069 DESI2Q9BSY9 194 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 WRAP53Q9BUR4 548 aaKnown RBP16.79■□□□□ 0.28
PKP3-209ENST00000533069 PCDH12Q9NPG4 1184 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 KLK13Q9UKR3 277 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 ATP8A1Q9Y2Q0 1164 aa16.79■□□□□ 0.28
PKP3-209ENST00000533069 PCDHGA1Q9Y5H4 931 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms