RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SUV39H2Q9H5I1 410 aa18■□□□□ 0.47
PCF11-206ENST00000533018 LHX3Q9UBR4 397 aa18■□□□□ 0.47
PCF11-206ENST00000533018 SALL4Q9UJQ4 1053 aa18■□□□□ 0.47
PCF11-206ENST00000533018 DOLKQ9UPQ8 538 aa18■□□□□ 0.47
PCF11-206ENST00000533018 COQ6Q9Y2Z9 468 aa18■□□□□ 0.47
PCF11-206ENST00000533018 U3KQA8 63 aa18■□□□□ 0.47
PCF11-206ENST00000533018 ANKRD36A6QL64 1941 aa18■□□□□ 0.47
PCF11-206ENST00000533018 ARHGAP42A6NI28 874 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 LRRC53A6NM62 1247 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 MUSKO15146 869 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 GCATO75600 419 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 RNF8O76064 485 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 ANXA6P08133 673 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 HTR7P34969 479 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 RPIAP49247 311 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 PAPOLAP51003 745 aaKnown RBP17.99■□□□□ 0.47
PCF11-206ENST00000533018 NDST2P52849 883 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 GABREP78334 506 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 PPARDQ03181 441 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 GRM3Q14832 879 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 LRRC14Q15048 493 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 ASIC2Q16515 512 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 ANO6Q4KMQ2 910 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 FILIP1LQ4L180 1135 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 ERMARDQ5T6L9 678 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 GUSBP11Q6P575 273 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 TP53I13Q8NBR0 393 aaPredicted RBP17.99■□□□□ 0.47
PCF11-206ENST00000533018 SNIP1Q8TAD8 396 aaKnown RBP17.99■□□□□ 0.47
PCF11-206ENST00000533018 NAF1Q96HR8 494 aaKnown RBP17.99■□□□□ 0.47
PCF11-206ENST00000533018 VCPIP1Q96JH7 1222 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 BBC3Q96PG8 261 aaPredicted RBP17.99■□□□□ 0.47
PCF11-206ENST00000533018 LGMNQ99538 433 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 LRRC19Q9H756 370 aa17.99■□□□□ 0.47
PCF11-206ENST00000533018 PTPRQQ9UMZ3 2332 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 TOR1BO14657 336 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 TPP1O14773 563 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 PALMO75781 387 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 TGM2P21980 687 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 SUOXP51687 545 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 IRF4Q15306 451 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 TCEA2Q15560 299 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 UGP2Q16851 508 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 TMEM52BQ4KMG9 183 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 PPP6R3Q5H9R7 873 aaPredicted RBP17.98■□□□□ 0.47
PCF11-206ENST00000533018 MACC1Q6ZN28 852 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 RD3Q7Z3Z2 195 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 LSMEM2Q8N112 164 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 SLC39A8Q9C0K1 460 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 SYNDIG1Q9H7V2 258 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 PCDH12Q9NPG4 1184 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 MYO6Q9UM54 1294 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 RAI2Q9Y5P3 530 aa17.98■□□□□ 0.47
PCF11-206ENST00000533018 EME2A4GXA9 379 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 SMTNL1A8MU46 457 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 DFFAO00273 331 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 PRPSAP2O60256 369 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 LZTS3O60299 673 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 PRAMEF11O60813 436 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 PRKCGP05129 697 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 C6P13671 934 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 CTSEP14091 401 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 TSHRP16473 764 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 HTR1BP28222 390 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 CA9Q16790 459 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 ESRP1Q6NXG1 681 aaKnown RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 ENPP7Q6UWV6 458 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 CAMK1DQ8IU85 385 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 HID1Q8IV36 788 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 HCAR2Q8TDS4 363 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 SCG3Q8WXD2 468 aaKnown RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 ZNF578Q96N58 590 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 ZNF641Q96N77 438 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 FCRL3Q96P31 734 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 SNRNP25Q9BV90 132 aaKnown RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 LRRC61Q9BV99 259 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 CINPQ9BW66 212 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 HAUS4Q9H6D7 363 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 ATP13A3Q9H7F0 1226 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 SP110Q9HB58 689 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 PDFQ9HBH1 243 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 RTN4Q9NQC3 1192 aaKnown RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 GULP1Q9UBP9 304 aa17.97■□□□□ 0.47
PCF11-206ENST00000533018 PNMA8BQ9ULN7 279 aaPredicted RBP17.97■□□□□ 0.47
PCF11-206ENST00000533018 TMEM110-MUSTN1A8MSY1 372 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 LMO7DNF2Z398 122 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 RIOK3O14730 519 aaKnown RBP17.96■□□□□ 0.47
PCF11-206ENST00000533018 YY2O15391 372 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 BUB1BO60566 1050 aaPredicted RBP17.96■□□□□ 0.47
PCF11-206ENST00000533018 FTLP02792 175 aaPredicted RBP17.96■□□□□ 0.47
PCF11-206ENST00000533018 PCCBP05166 539 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 ERCC2P18074 760 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 SERPINA4P29622 427 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 LIG3P49916 1009 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 BLKP51451 505 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 PCBP4P57723 403 aaKnown RBP17.96■□□□□ 0.47
PCF11-206ENST00000533018 INPP5AQ14642 412 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 ISXQ2M1V0 245 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 WSCD2Q2TBF2 565 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 C3orf38Q5JPI3 329 aa17.96■□□□□ 0.47
PCF11-206ENST00000533018 C6orf132Q5T0Z8 1188 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms