RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 C2orf54Q08AI8 447 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 SFSWAPQ12872 951 aaKnown RBP12.64□□□□□ -0.39
COPB1-208ENST00000532088 MPP3Q13368 585 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 SEMA5AQ13591 1074 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 GAS6Q14393 721 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 PPP1R7Q15435 360 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 FAM46CQ5VWP2 391 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 KLHL7Q8IXQ5 586 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 CAMKK1Q8N5S9 505 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 LRRC45Q96CN5 670 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 FAM129BQ96TA1 746 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 SEMA3CQ99985 751 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 ATP13A3Q9H7F0 1226 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 ZFAND3Q9H8U3 227 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 NOD2Q9HC29 1040 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 EIF2B3Q9NR50 452 aaKnown RBP12.64□□□□□ -0.39
COPB1-208ENST00000532088 DKK3Q9UBP4 350 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 FAM153AQ9UHL3 310 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 PPM1HQ9ULR3 514 aa12.64□□□□□ -0.39
COPB1-208ENST00000532088 TECTAO75443 2155 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 TSPAN11A1L157 253 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 ANTXRLA6NF34 631 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 ALDH1A2O94788 518 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 MMP2P08253 660 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 HOXA6P31267 233 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 MAGEA6P43360 314 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 SUOXP51687 545 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 COPAP53621 1224 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 MAXP61244 160 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 RPL26P61254 145 aaKnown RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 CDK16Q00536 496 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 DSC2Q02487 901 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 BCL2L1Q07817 233 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 ITKQ08881 620 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 NIPAL4Q0D2K0 466 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 CCDC15Q0P6D6 951 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 ATXN7L2Q5T6C5 722 aaPredicted RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 ZNF776Q68DI1 518 aaPredicted RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 BRAT1Q6PJG6 821 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 PCGF5Q86SE9 256 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 PRPF39Q86UA1 669 aaKnown RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 JAMLQ86YT9 394 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 STK40Q8N2I9 435 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 CHST14Q8NCH0 376 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 VOPP1Q96AW1 172 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 ECHDC3Q96DC8 303 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 CCDC97Q96F63 343 aaPredicted RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 PPP1R16AQ96I34 528 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 EXOC2Q96KP1 924 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 CARD6Q9BX69 1037 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 CEP41Q9BYV8 373 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 RAB17Q9H0T7 212 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 EVLQ9UI08 416 aaPredicted RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 RPL26L1Q9UNX3 145 aaKnown RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 TTLL3Q9Y4R7 772 aa12.63□□□□□ -0.39
COPB1-208ENST00000532088 MYO18AQ92614 2054 aaKnown RBP12.63□□□□□ -0.39
COPB1-208ENST00000532088 TRAFD1O14545 582 aaPredicted RBP12.62□□□□□ -0.39
COPB1-208ENST00000532088 CAPN5O15484 640 aaPredicted RBP12.62□□□□□ -0.39
COPB1-208ENST00000532088 FZD6O60353 706 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 SUN1O94901 812 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 METTL18O95568 372 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 CTSLP07711 333 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 C5AR1P21730 350 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 PSMB4P28070 264 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 WASP42768 502 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 SCTRP47872 440 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 NRLP54845 237 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 DRG2P55039 364 aaKnown RBP12.62□□□□□ -0.39
COPB1-208ENST00000532088 SATB1Q01826 763 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 ZNF805Q5CZA5 627 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 KCTD11Q693B1 232 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 CCDC70Q6NSX1 233 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 KIAA1211LQ6NV74 962 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 C8orf74Q6P047 294 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 PKN3Q6P5Z2 889 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 KDELC1Q6UW63 502 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 GDPD4Q6W3E5 623 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 RYBPQ8N488 228 aaPredicted RBP12.62□□□□□ -0.39
COPB1-208ENST00000532088 FBXL6Q8N531 539 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 ZNF366Q8N895 744 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 GLIS1Q8NBF1 620 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 BBOF1Q8ND07 529 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 PIP4K2CQ8TBX8 421 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 FAM131CQ96AQ9 280 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 FEM1CQ96JP0 617 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 GORASP1Q9BQQ3 440 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 TDRD1Q9BXT4 1180 aaKnown RBP12.62□□□□□ -0.39
COPB1-208ENST00000532088 SUV39H2Q9H5I1 410 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 ZDHHC6Q9H6R6 413 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 ZDHHC4Q9NPG8 344 aa12.62□□□□□ -0.39
COPB1-208ENST00000532088 CCDC163A0A0D9SF12 145 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 LOC285095A0A1B0GVY8 99 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 AP3B1O00203 1094 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 TTI1O43156 1089 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 SLC7A4O43246 635 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 RAD51CO43502 376 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 LEFTY1O75610 366 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 SLU7O95391 586 aaKnown RBP12.61□□□□□ -0.39
COPB1-208ENST00000532088 AP2A1O95782 977 aa12.61□□□□□ -0.39
COPB1-208ENST00000532088 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms