RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 INSIG1O15503 277 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CCP110O43303 1012 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 C1QL1O75973 258 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 ANXA6P08133 673 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 EIF4A3P38919 411 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 SUOXP51687 545 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 COPB1P53618 953 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 C1QBPQ07021 282 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CYTH1Q15438 398 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 PARP15Q460N3 678 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 TMEM52BQ4KMG9 183 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 PERM1Q5SV97 790 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 C6orf132Q5T0Z8 1188 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 FAXCQ5TGI0 409 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 DNAJC24Q6P3W2 148 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 IGF2-ASQ6U949 168 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CRTC1Q6UUV9 634 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 MACC1Q6ZN28 852 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 RBM44Q6ZP01 1051 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 SLC35F3Q8IY50 421 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 UMODL1-AS1Q8N2C9 162 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 NEK11Q8NG66 645 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 GLMNQ92990 594 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 ATXN7L3BQ96GX2 97 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 VCPIP1Q96JH7 1222 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 AGPAT1Q99943 283 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CNPY3Q9BT09 278 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CPEB1Q9BZB8 566 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 CLPBQ9H078 707 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 THSD1Q9NS62 852 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 LIMA1Q9UHB6 759 aaKnown RBP12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 FZD10Q9ULW2 581 aa12.95□□□□□ -0.34
TM9SF1-211ENST00000531406 ANKRD62A6NC57 917 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 LGALS16A8MUM7 142 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 CREB3O43889 395 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 TCEA3O75764 348 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 TSHRP16473 764 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 XPAP23025 273 aaPredicted RBP12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 RBMS1P29558 406 aaKnown RBP12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 UCNP55089 124 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 RPL7AP62424 266 aaKnown RBP12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 PPARDQ03181 441 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 NCAPHQ15003 741 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 IRF4Q15306 451 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 C3orf38Q5JPI3 329 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 PPP1R15BQ5SWA1 713 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 BROXQ5VW32 411 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 PCSK4Q6UW60 755 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 HCAR2Q8TDS4 363 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 KCNE4Q8WWG9 221 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 NAT6Q93015 286 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 SLC46A1Q96NT5 459 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 MCEEQ96PE7 176 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 DPH1Q9BZG8 443 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 CATSPERBQ9H7T0 1116 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 SEPT11Q9NVA2 429 aaKnown RBP12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 PADI4Q9UM07 663 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 SATB2Q9UPW6 733 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 ENTPD2Q9Y5L3 495 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 ASXL3Q9C0F0 2248 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 CFAP46Q8IYW2 2715 aa12.94□□□□□ -0.34
TM9SF1-211ENST00000531406 TSPAN11A1L157 253 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 CASC3O15234 703 aaKnown RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 FGF10O15520 208 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 KLK10O43240 276 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 PIGNO95427 931 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 CELA2BP08218 269 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 CDK11BP21127 795 aaKnown RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 PEX5P50542 639 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 AIF1P55008 147 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 TMPRSS3P57727 454 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 UBXN1Q04323 297 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 ELP6Q0PNE2 266 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 LRRC14Q15048 493 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 WSCD2Q2TBF2 565 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 ESRP1Q6NXG1 681 aaKnown RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 PRR11Q96HE9 360 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 EXOC2Q96KP1 924 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 NCAPGQ9BPX3 1015 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 SUV39H2Q9H5I1 410 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 LRRC19Q9H756 370 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 CPNE5Q9HCH3 593 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 PCDH12Q9NPG4 1184 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 UBA2Q9UBT2 640 aaPredicted RBP12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 COQ6Q9Y2Z9 468 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 DOCK9Q9BZ29 2069 aa12.93□□□□□ -0.34
TM9SF1-211ENST00000531406 BPTFQ12830 3046 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 PMS2P1A4D2B8 440 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 LRRC10BA6NIK2 292 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 TMEM110-MUSTN1A8MSY1 372 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 J3KR12 359 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 BUB1BO60566 1050 aaPredicted RBP12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 PRAMEF11O60813 436 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 TPM3P06753 285 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 C6P13671 934 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 HTR7P34969 479 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 BLKP51451 505 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 HK3P52790 923 aa12.92□□□□□ -0.34
TM9SF1-211ENST00000531406 SKOR1P84550 965 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms