RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 HIC2Q96JB3 615 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 OLFM1Q99784 485 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 MRPL1Q9BYD6 325 aaKnown RBP19.41■□□□□ 0.7
VPS28-213ENST00000530983 CYP4F12Q9HCS2 524 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 TMLHEQ9NVH6 421 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 RBM22Q9NW64 420 aaKnown RBP eCLIP19.41■□□□□ 0.7
VPS28-213ENST00000530983 ADA2Q9NZK5 511 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 FLRT1Q9NZU1 646 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 ARL5CA6NH57 179 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 CLPTM1O96005 669 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 ZNF865P0CJ78 1059 aaPredicted RBP19.41■□□□□ 0.7
VPS28-213ENST00000530983 PSMD8P48556 350 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 SCNN1GP51170 649 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 KPNA2P52292 529 aaKnown RBP19.41■□□□□ 0.7
VPS28-213ENST00000530983 SLC12A2P55011 1212 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 PSME3P61289 254 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 FAM110CQ1W6H9 321 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 NOMO2Q5JPE7 1267 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 NEPROQ6NW34 567 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 FAM171BQ6P995 826 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 GALNT4Q8N4A0 578 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 METTL25Q8N6Q8 603 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 APPL1Q9UKG1 709 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 PTPRDP23468 1912 aa19.41■□□□□ 0.7
VPS28-213ENST00000530983 A8MT66 165 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 FGF10O15520 208 aaPredicted RBP19.4■□□□□ 0.7
VPS28-213ENST00000530983 HOXC8P31273 242 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 PFKPQ01813 784 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 UPP1Q16831 310 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 IL23RQ5VWK5 629 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 AHI1Q8N157 1196 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 SCML4Q8N228 414 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 MEAF6Q9HAF1 191 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 TRPC7Q9HCX4 862 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 PATJQ8NI35 1801 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 E7ENX8 843 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 FBP2O00757 339 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 MSI1O43347 362 aaKnown RBP19.4■□□□□ 0.7
VPS28-213ENST00000530983 ASLP04424 464 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 LRP8Q14114 963 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 PPP1R3AQ16821 1122 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 FAM83EQ2M2I3 478 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 RNF135Q8IUD6 432 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 LZTR1Q8N653 840 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 ATP6V1E2Q96A05 226 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 DGCR14Q96DF8 476 aaKnown RBP19.4■□□□□ 0.7
VPS28-213ENST00000530983 FCRL2Q96LA5 508 aaPredicted RBP19.4■□□□□ 0.7
VPS28-213ENST00000530983 CATSPERBQ9H7T0 1116 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 ZNF696Q9H7X3 374 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 ZNF408Q9H9D4 720 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 CACNA2D2Q9NY47 1150 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 SUCOQ9UBS9 1254 aaKnown RBP19.4■□□□□ 0.7
VPS28-213ENST00000530983 ST3GAL5Q9UNP4 418 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 TLL2Q9Y6L7 1015 aa19.4■□□□□ 0.7
VPS28-213ENST00000530983 VILLO15195 856 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 IPO13O94829 963 aaKnown RBP19.39■□□□□ 0.69
VPS28-213ENST00000530983 TNFAIP8O95379 198 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PGFP49763 221 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 CPT1AP50416 773 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 TRIM25Q14258 630 aaKnown RBP19.39■□□□□ 0.69
VPS28-213ENST00000530983 MYBPC3Q14896 1274 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 EML3Q32P44 896 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PAN2Q504Q3 1202 aaKnown RBP19.39■□□□□ 0.69
VPS28-213ENST00000530983 BRMS1LQ5PSV4 323 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 KIAA0408Q6ZU52 694 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 NLRC5Q86WI3 1866 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 MPP4Q96JB8 637 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PRKD2Q9BZL6 878 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PCDHAC1Q9H158 963 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 GALNT8Q9NY28 637 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 SFMBT1Q9UHJ3 866 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 MYOCOSA0A1B0GUC4 107 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 HDCP19113 662 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 HSPA13P48723 471 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PDAP1Q13442 181 aaKnown RBP19.39■□□□□ 0.69
VPS28-213ENST00000530983 PCSK7Q16549 785 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 AGMOQ6ZNB7 445 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 CUZD1Q86UP6 607 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PNPLA1Q8N8W4 532 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 FAR2Q96K12 515 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 TMEM209Q96SK2 561 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 PKMYT1Q99640 499 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 ACBD6Q9BR61 282 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 UNC93B1Q9H1C4 597 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 EPS15L1Q9UBC2 864 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 HSFX1Q9UBD0 423 aa19.39■□□□□ 0.69
VPS28-213ENST00000530983 C8BP07358 591 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 ZNF26P17031 533 aaPredicted RBP19.38■□□□□ 0.69
VPS28-213ENST00000530983 PLK1P53350 603 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 USP46P62068 366 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 SQLEQ14534 574 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 PSMD5Q16401 504 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.38■□□□□ 0.69
VPS28-213ENST00000530983 NADK2Q4G0N4 442 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 FAM219BQ5XKK7 198 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 AFMIDQ63HM1 303 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 REP15Q6BDI9 236 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 RBM44Q6ZP01 1051 aaKnown RBP19.38■□□□□ 0.69
VPS28-213ENST00000530983 BEND5Q7L4P6 421 aa19.38■□□□□ 0.69
VPS28-213ENST00000530983 LRRTM3Q86VH5 581 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms