RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 NSUN2Q08J23 767 aaKnown RBP eCLIP18.89■□□□□ 0.61
GMDS-208ENST00000530927 STAT4Q14765 748 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 SHBQ15464 509 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 UGP2Q16851 508 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 MARC1Q5VT66 337 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 KAZNQ674X7 775 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 KIAA1161Q6NSJ0 714 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 C11orf63Q6NUN7 778 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 DAAM2Q86T65 1068 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 KIAA1328Q86T90 577 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 TEX26Q8N6G2 289 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 OR13H1Q8NG92 308 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 RAB7BQ96AH8 199 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 FEM1CQ96JP0 617 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 TUBGCP5Q96RT8 1024 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 CEP41Q9BYV8 373 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 BTBD3Q9Y2F9 522 aa18.89■□□□□ 0.61
GMDS-208ENST00000530927 LRRK1Q38SD2 2015 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 GOLGA8CPA6NN73 597 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 UPK3BL1B0FP48 263 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 UPK3BL2E5RIL1 263 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 KCNK1O00180 336 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 APOL1O14791 398 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 PSTPIP1O43586 416 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 TSPAN6O43657 245 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 IPO7O95373 1038 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 HNRNPA2B1P22626 353 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 SERPINA4P29622 427 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 CDKN2BP42772 138 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 NAP1L1P55209 391 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 TRAF2Q12933 501 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 IFI16Q16666 785 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 ZNF423Q2M1K9 1284 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 CFAP58Q5T655 872 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 IL27RAQ6UWB1 636 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 SPOCD1Q6ZMY3 1216 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 SLC22A18ASQ8N1D0 253 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 CCNYQ8ND76 341 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 PDCD6IPQ8WUM4 868 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 MAML1Q92585 1016 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 ECHDC3Q96DC8 303 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 BMFQ96LC9 184 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 ZNF641Q96N77 438 aaPredicted RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 SMIM14Q96QK8 99 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 NUDCD1Q96RS6 583 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 KLF6Q99612 283 aaPredicted RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 C1QTNF2Q9BXJ5 285 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 LUC7LQ9NQ29 371 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 SCUBE2Q9NQ36 999 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 DDX56Q9NY93 547 aaKnown RBP18.88■□□□□ 0.61
GMDS-208ENST00000530927 TTLL3Q9Y4R7 772 aa18.88■□□□□ 0.61
GMDS-208ENST00000530927 A0A0U1RQS6 177 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 SPAARA0A1B0GVQ0 90 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 MACROD2A1Z1Q3 448 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 GRID2IPA4D2P6 1211 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 MATN3O15232 486 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 PJA2O43164 708 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 HLA-DQB2P05538 268 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 PECAM1P16284 738 aaPredicted RBP18.87■□□□□ 0.61
GMDS-208ENST00000530927 XPAP23025 273 aaPredicted RBP18.87■□□□□ 0.61
GMDS-208ENST00000530927 AKT2P31751 481 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 RENBPP51606 427 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 AP1S1P61966 158 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 DSC2Q02487 901 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 TPRG1LQ5T0D9 272 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 ERMP1Q7Z2K6 904 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 GATAD2AQ86YP4 633 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 NAXDQ8IW45 347 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 MFSD2AQ8NA29 543 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 CXorf40AQ8TE69 158 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 NSMCE1Q8WV22 266 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 HERPUD2Q9BSE4 406 aa18.87■□□□□ 0.61
GMDS-208ENST00000530927 MAK16Q9BXY0 300 aaKnown RBP18.87■□□□□ 0.61
GMDS-208ENST00000530927 RBM22Q9NW64 420 aaKnown RBP eCLIP18.87■□□□□ 0.611e-6■□□□□ 9.5
GMDS-208ENST00000530927 ZNF487B1APH4 448 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 RIOK3O14730 519 aaKnown RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 PTMAP06454 111 aaKnown RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 THEGLP0DJG4 465 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 CCNCP24863 283 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 ITKQ08881 620 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 RALGDSQ12967 914 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 ZBTB17Q13105 803 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 GRM3Q14832 879 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 TAZQ16635 292 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 ODF2Q5BJF6 829 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 N4BP2L1Q5TBK1 243 aaPredicted RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 AADACL2Q6P093 401 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 CCDC13Q8IYE1 715 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 LRRC57Q8N9N7 239 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 HAUS1Q96CS2 278 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 HDAC11Q96DB2 347 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 TSGA13Q96PP4 275 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 ELF4Q99607 663 aaPredicted RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 SEMA3CQ99985 751 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 GDF3Q9NR23 364 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 MBNL1Q9NR56 388 aaKnown RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 TPX2Q9ULW0 747 aaKnown RBP18.86■□□□□ 0.61
GMDS-208ENST00000530927 ATP8A1Q9Y2Q0 1164 aa18.86■□□□□ 0.61
GMDS-208ENST00000530927 CNOT1A5YKK6 2376 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms