RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 TBC1D17Q9HA65 648 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 SAYSD1Q9NPB0 183 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 EIF2B3Q9NR50 452 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 SYBUQ9NX95 663 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 MTRF1LQ9UGC7 380 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 IL36AQ9UHA7 158 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 SARDHQ9UL12 918 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CHMP2BQ9UQN3 213 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 STARD13Q9Y3M8 1113 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 TECTAO75443 2155 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 GOLGA8CPA6NN73 597 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 PDGFBP01127 241 aaPredicted RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 IL1BP01584 269 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ALPIP09923 528 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ATXN1LP0C7T5 689 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 HNRNPLP14866 589 aaKnown RBP eCLIP10.74□□□□□ -0.69
SOX6-213ENST00000530378 TNFRSF8P28908 595 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 SERPINA4P29622 427 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 NTSR1P30989 418 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 SLC8A1P32418 973 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 TNNT3P45378 269 aaPredicted RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 DHX9Q08211 1270 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 NAPEPLDQ6IQ20 393 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CASC4Q6P4E1 433 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ZBED8Q8IZ13 594 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 OR8D1Q8WZ84 308 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 TADA1Q96BN2 335 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 CFAP36Q96G28 342 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 FEM1CQ96JP0 617 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 C9orf72Q96LT7 481 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 TRIB3Q96RU7 358 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 WDR83Q9BRX9 315 aaKnown RBP10.74□□□□□ -0.69
SOX6-213ENST00000530378 LTB4R2Q9NPC1 389 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 VPS45Q9NRW7 570 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 C2orf42Q9NWW7 574 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 RAB21Q9UL25 225 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 MAD1L1Q9Y6D9 718 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ZDBF2Q9HCK1 2354 aa10.74□□□□□ -0.69
SOX6-213ENST00000530378 ERI2A8K979 691 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 MAN2B1O00754 1011 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 BUD23O43709 281 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 SYNCRIPO60506 623 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 SUN1O94901 812 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 POP4O95707 220 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 CPP00450 1065 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 PRLP01236 227 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 GLULP15104 373 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 EPHB1P54762 984 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 ARL4CP56559 192 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 CAV1Q03135 178 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 PRKCQQ04759 706 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 RAD51Q06609 339 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 SLC1A5Q15758 541 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 ARMC12Q5T9G4 340 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 DENND5AQ6IQ26 1287 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 SDE2Q6IQ49 451 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 FBXO38Q6PIJ6 1188 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 CES3Q6UWW8 571 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 GDPD4Q6W3E5 623 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 IGDCC3Q8IVU1 814 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 PDIK1LQ8N165 341 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 BLOC1S5Q8TDH9 187 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 AENQ8WTP8 325 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 LMAN1LQ9HAT1 526 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 CASS4Q9NQ75 786 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 WNT16Q9UBV4 365 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 SPO11Q9Y5K1 396 aa10.73□□□□□ -0.69
SOX6-213ENST00000530378 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.73□□□□□ -0.69
SOX6-213ENST00000530378 LRRK1Q38SD2 2015 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 KANSL1LA0AUZ9 987 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 FAM170BA6NMN3 283 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CCL22O00626 93 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 TRAFD1O14545 582 aaPredicted RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 PGLSO95336 258 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 NDST3O95803 873 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 ELK3P41970 407 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 ABL2P42684 1182 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 MAPK8P45983 427 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CSNK1DP48730 415 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 CDH17Q12864 832 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 ELAVL3Q14576 367 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 STARD3Q14849 445 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 LRRC8BQ6P9F7 803 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 TMEM92Q6UXU6 159 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 PARS2Q7L3T8 475 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 KLHDC8BQ8IXV7 354 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 UBALD2Q8IYN6 164 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 MCUQ8NE86 351 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 FBXO36Q8NEA4 188 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 UHMK1Q8TAS1 419 aaKnown RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 PIP4K2CQ8TBX8 421 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 RUBCNQ92622 972 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 MSANTD3Q96H12 275 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 PPP1R2P1Q96PQ5 205 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 UHRF1Q96T88 793 aaPredicted RBP10.72□□□□□ -0.69
SOX6-213ENST00000530378 FAM129BQ96TA1 746 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 SUV39H2Q9H5I1 410 aa10.72□□□□□ -0.69
SOX6-213ENST00000530378 XAB2Q9HCS7 855 aaKnown RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms