RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	SLC6A4	P31645	630 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	ETFB	P38117	255 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	FCHO2	Q0JRZ9	810 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	KCNJ11	Q14654	390 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	PAFAH1B3	Q15102	231 aa	Known RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	SMAD2	Q15796	467 aa	Known RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	AAK1	Q2M2I8	961 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	TRMT5	Q32P41	509 aa	Known RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	THEMIS2	Q5TEJ8	643 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	SETD3	Q86TU7	594 aa	Predicted RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	PDCD7	Q8N8D1	485 aa	Known RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	ATP2A3	Q93084	1043 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	TTC17	Q96AE7	1141 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	BRD8	Q9H0E9	1235 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	DUS2	Q9NX74	493 aa	Known RBP	14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	IKBKG	Q9Y6K9	419 aa		14.76	□□□□□ -0.05
NR1H3-231	ENST00000529540	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	TCRBV9S1A1T	A0A576	114 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	GRXCR2	A6NFK2	248 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	GFRA2	O00451	464 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	CHAD	O15335	359 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	ADH1C	P00326	375 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	C1QA	P02745	245 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	FCAR	P24071	287 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	ELK3	P41970	407 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	NDST2	P52849	883 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	YBEY	P58557	167 aa	Predicted RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	EIF3E	P60228	445 aa	Known RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	ZNF177	Q13360	481 aa	Predicted RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	DNAL1	Q4LDG9	190 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	NCBP2-AS2	Q69YL0	99 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	ZNF783	Q6ZMS7	281 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	C14orf80	Q86SX3	495 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	ZC3H18	Q86VM9	953 aa	Known RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	SLC26A11	Q86WA9	606 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	MYLK4	Q86YV6	388 aa	Predicted RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	PQLC3	Q8N755	202 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	MAFA	Q8NHW3	353 aa	Predicted RBP	14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	DDI1	Q8WTU0	396 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	WBP2	Q969T9	261 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	DOCK6	Q96HP0	2047 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	NMUR2	Q9GZQ4	415 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	SPHK2	Q9NRA0	654 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	MARK1	Q9P0L2	795 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	PLA2G4C	Q9UP65	541 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	NEU3	Q9UQ49	428 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	CHMP2B	Q9UQN3	213 aa		14.75	□□□□□ -0.05
NR1H3-231	ENST00000529540	KLHL33	A6NCF5	533 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	COPE	O14579	308 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	MCF2L	O15068	1137 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TM7SF2	O76062	418 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	PYGB	P11216	843 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	AMPD1	P23109	780 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	OR1E1	P30953	314 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	VIPR2	P41587	438 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	DYNLT1	P63172	113 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	ZNF33A	Q06730	810 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	THOC5	Q13769	683 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	DBN1	Q16643	649 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	KBTBD12	Q3ZCT8	623 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	C6orf163	Q5TEZ5	329 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	ATG16L1	Q676U5	607 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	KYAT3	Q6YP21	454 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	IGDCC3	Q8IVU1	814 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	UMODL1-AS1	Q8N2C9	162 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	PLD5	Q8N7P1	536 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	IRF7	Q92985	503 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	IGSF8	Q969P0	613 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	PRICKLE1	Q96MT3	831 aa	Predicted RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	MAGEB5	Q9BZ81	275 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	WWP1	Q9H0M0	922 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	SIRPG	Q9P1W8	387 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TAGLN3	Q9UI15	199 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TTLL3	Q9Y4R7	772 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	SNX10	Q9Y5X0	201 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	HACD1	B0YJ81	288 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	ANHX	E9PGG2	379 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	CIB2	O75838	187 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	STIP1	P31948	543 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	CDH18	Q13634	790 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	PDK1	Q15118	436 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	PARP15	Q460N3	678 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TANGO2	Q6ICL3	276 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	POTEH	Q6S545	545 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	VIT	Q6UXI7	678 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	ADGRG6	Q86SQ4	1221 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TTC7B	Q86TV6	843 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	KBTBD2	Q8IY47	623 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	ADGRG2	Q8IZP9	1017 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	CPA6	Q8N4T0	437 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	SRPK1	Q96SB4	655 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	TRMT61B	Q9BVS5	477 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	SLC2A11	Q9BYW1	496 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	MPP6	Q9NZW5	540 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	CPSF2	Q9P2I0	782 aa	Known RBP	14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	IGSF9	Q9P2J2	1179 aa		14.74	□□□□□ -0.05
NR1H3-231	ENST00000529540	FAM237B	A0A1B0GVD1	139 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540		B2RBV5	119 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540	SPECC1L-ADORA2A	F8WAN1	911 aa		14.73	□□□□□ -0.05
NR1H3-231	ENST00000529540		H0Y626	953 aa		14.73	□□□□□ -0.05

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms