RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-208ENST00000528475 MSX2P35548 267 aaPredicted RBP23.58■■□□□ 1.36
GSDMD-208ENST00000528475 RPL5P46777 297 aaKnown RBP23.58■■□□□ 1.36
GSDMD-208ENST00000528475 LEPRP48357 1165 aaKnown RBP23.58■■□□□ 1.36
GSDMD-208ENST00000528475 PSME3P61289 254 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 KDELC1Q6UW63 502 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 AGMOQ6ZNB7 445 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 SATL1Q86VE3 508 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 LPPQ93052 612 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 UNC93B1Q9H1C4 597 aa23.58■■□□□ 1.36
GSDMD-208ENST00000528475 HEATR9A2RTY3 570 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 WASH4PA8MWX3 477 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 H0YJX3 145 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 IPO13O94829 963 aaKnown RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 C8BP07358 591 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 LTA4HP09960 611 aaKnown RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 CSHL1Q14406 222 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 USP41Q3LFD5 358 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 GK5Q6ZS86 529 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 MRPL10Q7Z7H8 261 aaKnown RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 RNF148Q8N7C7 305 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 RTL3Q8N8U3 475 aaKnown RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 SGF29Q96ES7 293 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 TSPAN17Q96FV3 270 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 FCRL2Q96LA5 508 aaPredicted RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 PAAF1Q9BRP4 392 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 SUDS3Q9H7L9 328 aaPredicted RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 ATP13A1Q9HD20 1204 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 TMLHEQ9NVH6 421 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 OSER1Q9NX31 292 aa23.57■■□□□ 1.36
GSDMD-208ENST00000528475 NYNRINQ9P2P1 1898 aaKnown RBP23.57■■□□□ 1.36
GSDMD-208ENST00000528475 A8MT66 165 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 KCNU1A8MYU2 1149 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 TNFAIP8O95379 198 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 CHRNA4P43681 627 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 PURAQ00577 322 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 LRP8Q14114 963 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 TRIM25Q14258 630 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 RBM20Q5T481 1227 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 KLC3Q6P597 504 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 HMGCLL1Q8TB92 370 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 DGCR14Q96DF8 476 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 ZFRQ96KR1 1074 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 OLFM1Q99784 485 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 MRPS26Q9BYN8 205 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 SLC25A51Q9H1U9 297 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 NDFIP2Q9NV92 336 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 DSEQ9UL01 958 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 NEMP2A6NFY4 417 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 TFAP2AP05549 437 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 HNRNPLP14866 589 aaKnown RBP eCLIP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 WNT3AP56704 352 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 TRAP1Q12931 704 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 SEPT6Q14141 434 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 SPATA24Q86W54 205 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 SLC22A9Q8IVM8 553 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 FATE1Q969F0 183 aa23.56■■□□□ 1.36
GSDMD-208ENST00000528475 UNKQ9C0B0 810 aaKnown RBP23.56■■□□□ 1.36
GSDMD-208ENST00000528475 AURKAO14965 403 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 TRIM24O15164 1050 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 PAPSS2O95340 614 aaPredicted RBP23.55■■□□□ 1.36
GSDMD-208ENST00000528475 PENKP01210 267 aaPredicted RBP23.55■■□□□ 1.36
GSDMD-208ENST00000528475 PAX3P23760 479 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 ACAP2Q15057 778 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 MAPRE1Q15691 268 aaKnown RBP23.55■■□□□ 1.36
GSDMD-208ENST00000528475 CUZD1Q86UP6 607 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 SCAMP5Q8TAC9 235 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 DUS3LQ96G46 650 aaKnown RBP23.55■■□□□ 1.36
GSDMD-208ENST00000528475 UBXN10Q96LJ8 280 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 CACNA2D2Q9NY47 1150 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 LZTS1Q9Y250 596 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 ANKRD33BA6NCL7 494 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 UBDO15205 165 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 RNASEH2AO75792 299 aaKnown RBP23.55■■□□□ 1.36
GSDMD-208ENST00000528475 CLPTM1O96005 669 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 INHBEP58166 350 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 PTPN18Q99952 460 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 TRMOQ9BU70 441 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 SLC2A11Q9BYW1 496 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 ADA2Q9NZK5 511 aa23.55■■□□□ 1.36
GSDMD-208ENST00000528475 E9PAM4 449 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 M0QZQ0 153 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 KCNA5P22460 613 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 SLC26A3P40879 764 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 RGS2P41220 211 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 FASTKQ14296 549 aaKnown RBP23.54■■□□□ 1.36
GSDMD-208ENST00000528475 REP15Q6BDI9 236 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 ZNF280DQ6N043 979 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 HACD2Q6Y1H2 254 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 RIN3Q8TB24 985 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 CASP10Q92851 521 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 IPO11Q9UI26 975 aaKnown RBP23.54■■□□□ 1.36
GSDMD-208ENST00000528475 PADI4Q9UM07 663 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 PTPRDP23468 1912 aa23.54■■□□□ 1.36
GSDMD-208ENST00000528475 PSMD12O00232 456 aaPredicted RBP23.53■■□□□ 1.36
GSDMD-208ENST00000528475 WISP3O95389 354 aaPredicted RBP23.53■■□□□ 1.36
GSDMD-208ENST00000528475 PGM3O95394 542 aa23.53■■□□□ 1.36
GSDMD-208ENST00000528475 ATP4BP51164 291 aa23.53■■□□□ 1.36
GSDMD-208ENST00000528475 C1QTNF8P60827 252 aa23.53■■□□□ 1.36
GSDMD-208ENST00000528475 MYBPC1Q00872 1141 aa23.53■■□□□ 1.36
GSDMD-208ENST00000528475 PDAP1Q13442 181 aaKnown RBP23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms