RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 MACROD2A1Z1Q3 448 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 TTC24A2A3L6 582 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 FPGTO14772 594 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 MUSKO15146 869 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 MMP20O60882 483 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PAK4O96013 591 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PTMAP06454 111 aaKnown RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 KRT10P13645 584 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CCNB1P14635 433 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CA4P22748 312 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CTSKP43235 329 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CCT8P50990 548 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 NXPH1P58417 271 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 MAXP61244 160 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 AP1B1Q10567 949 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 INAVAQ3KP66 663 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 RALGPS1Q5JS13 557 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PSAPL1Q6NUJ1 521 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 MFSD7Q6UXD7 560 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PTAR1Q7Z6K3 402 aaPredicted RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CCDC13Q8IYE1 715 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 KATNAL2Q8IYT4 538 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 RCOR2Q8IZ40 523 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 SYCE1Q8N0S2 351 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 OXR1Q8N573 874 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CCDC112Q8NEF3 446 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 DEFB124Q8NES8 71 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 FAM174AQ8TBP5 190 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 TSGA13Q96PP4 275 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 NUDCD1Q96RS6 583 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 MGME1Q9BQP7 344 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 IL21RQ9HBE5 538 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PCDH12Q9NPG4 1184 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 RBM22Q9NW64 420 aaKnown RBP eCLIP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 DTLQ9NZJ0 730 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 SEPT10Q9P0V9 454 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 GGT7Q9UJ14 662 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 ZFR2Q9UPR6 939 aaKnown RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 CA5BQ9Y2D0 317 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 FNDC3AQ9Y2H6 1198 aaKnown RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 ATP8A1Q9Y2Q0 1164 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 REXO2Q9Y3B8 237 aaKnown RBP13.5□□□□□ -0.25
CAPN1-215ENST00000528396 PCDH15Q96QU1 1955 aa13.5□□□□□ -0.25
CAPN1-215ENST00000528396 ASCC3Q8N3C0 2202 aaKnown RBP13.49□□□□□ -0.25
CAPN1-215ENST00000528396 TRPM6Q9BX84 2022 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 TSPAN11A1L157 253 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 RCCD1A6NED2 376 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 C3orf70A6NLC5 250 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-215ENST00000528396 A6NNZ2 444 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 H0Y8X5 98 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 KCNK3O14649 394 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 WNT9AO14904 365 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 AREL1O15033 823 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 YKT6O15498 198 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 PJA2O43164 708 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 LZTS3O60299 673 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-215ENST00000528396 SOCS5O75159 536 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 GJB3O75712 270 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 TM7SF2O76062 418 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 KCNK5O95279 499 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 PEX11BO96011 259 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 WNT1P04628 370 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 ZNF883P0CG24 379 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 THEGLP0DJG4 465 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 CSRP1P21291 193 aaKnown RBP13.49□□□□□ -0.25
CAPN1-215ENST00000528396 CES1P23141 567 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 NR2C2P49116 596 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 FOXK2Q01167 660 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 BNC1Q01954 994 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 LLGL1Q15334 1064 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 TFDP3Q5H9I0 405 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 SLC9A4Q6AI14 798 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 SPOCD1Q6ZMY3 1216 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 TMEM139Q8IV31 216 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 NAXDQ8IW45 347 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 NDUFAF2Q8N183 169 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 PLD5Q8N7P1 536 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 EXD1Q8NHP7 514 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 HDAC11Q96DB2 347 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 LGMNQ99538 433 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 ELF4Q99607 663 aaPredicted RBP13.49□□□□□ -0.25
CAPN1-215ENST00000528396 SEMA3CQ99985 751 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 C1QTNF2Q9BXJ5 285 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 LACRTQ9GZZ8 138 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 BRD8Q9H0E9 1235 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 NOD2Q9HC29 1040 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 AMACRQ9UHK6 382 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 PCDHGC4Q9Y5F7 938 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 DUSP10Q9Y6W6 482 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 SHROOM3Q8TF72 1996 aa13.49□□□□□ -0.25
CAPN1-215ENST00000528396 A0A1W2PR77 199 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CCDC66A2RUB6 948 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 C10orf142B7Z368 130 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
CAPN1-215ENST00000528396 TM4SF5O14894 197 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CST8O60676 142 aa13.48□□□□□ -0.25
CAPN1-215ENST00000528396 CPP00450 1065 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms