RNA–Protein interactions for RNA: ENST00000527897.1

CAPN1-213, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 879 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-213ENST00000527897 PDE1CQ14123 709 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-213ENST00000527897 RFTN1Q14699 578 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-213ENST00000527897 UGP2Q16851 508 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ASTE1Q2TB18 679 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-213ENST00000527897 HS1BP3Q53T59 392 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ERAP2Q6P179 960 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ZSCAN30Q86W11 494 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ZNF641Q96N77 438 aaPredicted RBP15.68■□□□□ 0.1
CAPN1-213ENST00000527897 TUBGCP5Q96RT8 1024 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 C1QTNF7Q9BXJ2 289 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 UCKL1Q9NWZ5 548 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 MSRB2Q9Y3D2 182 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 ASPMQ8IZT6 3477 aa15.68■□□□□ 0.1
CAPN1-213ENST00000527897 PTPRBP23467 1997 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 LRRK1Q38SD2 2015 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 MAP3K6O95382 1288 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 TMEM253P0C7T8 217 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 DGKAP23743 735 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 RABIFP47224 123 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 RENBPP51606 427 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 THOP1P52888 689 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 TAS2R40P59535 323 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 BRAT1Q6PJG6 821 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 DHRS13Q6UX07 377 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 ZSWIM9Q86XI8 627 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 MARCH9Q86YJ5 346 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 DCP2Q8IU60 420 aaKnown RBP15.67■□□□□ 0.1
CAPN1-213ENST00000527897 CNGA4Q8IV77 575 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 BBS5Q8N3I7 341 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 FAM174AQ8TBP5 190 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 PDCD6IPQ8WUM4 868 aaKnown RBP15.67■□□□□ 0.1
CAPN1-213ENST00000527897 ZNF599Q96NL3 588 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 LENG8Q96PV6 779 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-213ENST00000527897 KLF6Q99612 283 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-213ENST00000527897 EPG5Q9HCE0 2579 aa15.67■□□□□ 0.1
CAPN1-213ENST00000527897 WDFY3Q8IZQ1 3526 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 FAM149AA5PLN7 773 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 A8MX80 341 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 MFSD11O43934 449 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 LZTS3O60299 673 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-213ENST00000527897 MAFKO60675 156 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 PIAS2O75928 621 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 PROS1P07225 676 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 C6P13671 934 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 IGFALSP35858 605 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 CSNK1DP48730 415 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 LIG3P49916 1009 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 MAXP61244 160 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 DPYSL3Q14195 570 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 FZD2Q14332 565 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 KANSL1Q7Z3B3 1105 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 SLC25A45Q8N413 288 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.66■□□□□ 0.1
CAPN1-213ENST00000527897 DENND6BQ8NEG7 585 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 SLC35G2Q8TBE7 412 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 TSC1Q92574 1164 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 GATA6Q92908 595 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 PSKH2Q96QS6 385 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 SCUBE2Q9NQ36 999 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 MBNL1Q9NR56 388 aaKnown RBP15.66■□□□□ 0.1
CAPN1-213ENST00000527897 RCOR3Q9P2K3 495 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-213ENST00000527897 ATP8A1Q9Y2Q0 1164 aa15.66■□□□□ 0.1
CAPN1-213ENST00000527897 COL5A1P20908 1838 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-213ENST00000527897 TSPAN11A1L157 253 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 TRIM38O00635 465 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 RIOK3O14730 519 aaKnown RBP15.65■□□□□ 0.1
CAPN1-213ENST00000527897 SIGLEC6O43699 453 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 KRT7P08729 469 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 TNNT1P13805 278 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 IL4RP24394 825 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 MMP13P45452 471 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 SUOXP51687 545 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 CLDN6P56747 220 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 AP1S1P61966 158 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 HNRNPKP61978 463 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAPN1-213ENST00000527897 DAB2P98082 770 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 ITKQ08881 620 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 NSUN2Q08J23 767 aaKnown RBP eCLIP15.65■□□□□ 0.1
CAPN1-213ENST00000527897 IRF4Q15306 451 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 TMEM52BQ4KMG9 183 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 ANKRD20A8PQ5CZ79 823 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 TPRG1LQ5T0D9 272 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 MARC1Q5VT66 337 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 PARGQ86W56 976 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 MAP7D3Q8IWC1 876 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 PCDH19Q8TAB3 1148 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 HCAR2Q8TDS4 363 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 ASB12Q8WXK4 309 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 CENPTQ96BT3 561 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 NT5MQ9NPB1 228 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 LCMT1Q9UIC8 334 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 TTLL3Q9Y4R7 772 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 PCDHGC4Q9Y5F7 938 aa15.65■□□□□ 0.1
CAPN1-213ENST00000527897 GOLGA4Q13439 2230 aaKnown RBP15.65■□□□□ 0.1
CAPN1-213ENST00000527897 ARID1BQ8NFD5 2236 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-213ENST00000527897 PLXNB3Q9ULL4 1909 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 SPTY2D1-AS1A0A0U1RR47 76 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.64■□□□□ 0.09
CAPN1-213ENST00000527897 H3BM21 787 aa15.64■□□□□ 0.09
CAPN1-213ENST00000527897 RFPL3O75679 317 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms