RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RIOK3O14730 519 aaKnown RBP22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 DAPK3O43293 454 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 CTSEP14091 401 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 CXADRP78310 365 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 GRM3Q14832 879 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 LRRC14Q15048 493 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 ISXQ2M1V0 245 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 ESRP1Q6NXG1 681 aaKnown RBP22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 RD3Q7Z3Z2 195 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 SLC39A7Q92504 469 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 GPATCH2LQ9NWQ4 482 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 LHX3Q9UBR4 397 aa22.61■■□□□ 1.21
TRAPPC4-208ENST00000527680 LMO7DNF2Z398 122 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 GOLGA6L22H0YM25 854 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 YY2O15391 372 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 TSHRP16473 764 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 RBMS1P29558 406 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 BLKP51451 505 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 SUOXP51687 545 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 TLE3Q04726 772 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 TMEM52BQ4KMG9 183 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 C3orf38Q5JPI3 329 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 BROXQ5VW32 411 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 ERAP2Q6P179 960 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 MACC1Q6ZN28 852 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 HID1Q8IV36 788 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 TP53I13Q8NBR0 393 aaPredicted RBP22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 HCAR2Q8TDS4 363 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 SCG3Q8WXD2 468 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 CELF6Q96J87 481 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 DHX35Q9H5Z1 703 aaKnown RBP22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 SYNDIG1Q9H7V2 258 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 GULP1Q9UBP9 304 aa22.6■■□□□ 1.21
TRAPPC4-208ENST00000527680 RP1P56715 2156 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 ARHGAP42A6NI28 874 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 TMEM110-MUSTN1A8MSY1 372 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 J3KR12 359 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 EEF2KO00418 725 aaKnown RBP22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 LZTS3O60299 673 aaPredicted RBP22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PSMA2P25787 234 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 HTR1BP28222 390 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 NDST2P52849 883 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 IRF4Q15306 451 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 TCEA2Q15560 299 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 UGP2Q16851 508 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PPP1R15BQ5SWA1 713 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 FOXR1Q6PIV2 292 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 ENPP7Q6UWV6 458 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 RBM44Q6ZP01 1051 aaKnown RBP22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 LRRC61Q9BV99 259 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 BOCQ9BWV1 1114 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PCDH12Q9NPG4 1184 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 THSD1Q9NS62 852 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PARVAQ9NVD7 372 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PCSK1NQ9UHG2 260 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PNMA8BQ9ULN7 279 aaPredicted RBP22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PADI4Q9UM07 663 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 AP4E1Q9UPM8 1137 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 SATB2Q9UPW6 733 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PTPRQQ9UMZ3 2332 aa22.59■■□□□ 1.21
TRAPPC4-208ENST00000527680 PRB1P04280 392 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 HTR7P34969 479 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 PEX5P50542 639 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 PAPOLAP51003 745 aaKnown RBP22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 ERVPABLB-1P60509 514 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 OGDHQ02218 1023 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 C19orf57Q0VDD7 668 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 ELOCQ15369 112 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 WSCD2Q2TBF2 565 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 PERM1Q5SV97 790 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 C6orf132Q5T0Z8 1188 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 PPP1R2P3Q6NXS1 205 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 SLC35F3Q8IY50 421 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 NAT6Q93015 286 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 TSACCQ96A04 125 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 GRAMD1AQ96CP6 724 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 ATXN7L3BQ96GX2 97 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 TBATAQ96M53 351 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 ZNF641Q96N77 438 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 SLC39A8Q9C0K1 460 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 CLPBQ9H078 707 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 LRRC19Q9H756 370 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 TAS2R14Q9NYV8 317 aa22.58■■□□□ 1.21
TRAPPC4-208ENST00000527680 TEX51A0A1B0GUA7 166 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 ATXN7O15265 892 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 PRAMEF11O60813 436 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 PALMO75781 387 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 RNF8O76064 485 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 DXOO77932 396 aaKnown RBP22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 C6P13671 934 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 LIG3P49916 1009 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 MAMLD1Q13495 774 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 INPP5AQ14642 412 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 ERMARDQ5T6L9 678 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 BRAT1Q6PJG6 821 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 IRF2BP2Q7Z5L9 587 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 CAMK1DQ8IU85 385 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 FSTL5Q8N475 847 aaPredicted RBP22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 AOPEPQ8N6M6 819 aa22.57■■□□□ 1.2
TRAPPC4-208ENST00000527680 KCNE4Q8WWG9 221 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms