RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 OTOP3Q7RTS5 596 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 KDELC2Q7Z4H8 507 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 ERI1Q8IV48 349 aaKnown RBP12.61□□□□□ -0.39
CAPN1-208ENST00000527323 HASPINQ8TF76 798 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 HSPBAP1Q96EW2 488 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 POM121Q96HA1 1249 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 DEFB118Q96PH6 123 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 NPY6RQ99463 290 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 FTHL17Q9BXU8 183 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 UNC93B1Q9H1C4 597 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 RRN3Q9NYV6 651 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 SCN1AP35498 2009 aa12.61□□□□□ -0.39
CAPN1-208ENST00000527323 FAM95CA0A1B0GW59 222 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TIPRLO75663 272 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 HOXA11P31270 313 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 RAB10P61026 200 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 ESRRGP62508 458 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 UGP2Q16851 508 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 USP41Q3LFD5 358 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 CEP97Q8IW35 865 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 AFAP1L2Q8N4X5 818 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF597Q96LX8 424 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 MRPL46Q9H2W6 279 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 AGO3Q9H9G7 860 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PLEKHA5Q9HAU0 1116 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PNPLA3Q9NST1 481 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 UTP6Q9NYH9 597 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TRHDEQ9UKU6 1024 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SNX10Q9Y5X0 201 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF839A8K0R7 811 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SEPT4O43236 478 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 HUS1O60921 280 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 BEST1O76090 585 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SEC24DO94855 1032 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 GABRB3P28472 473 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 CDK9P50750 372 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TKTL1P51854 596 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PLK1P53350 603 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PLOD1Q02809 727 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 CSHL1Q14406 222 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 OTUD1Q5VV17 481 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 KCTD11Q693B1 232 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 REP15Q6BDI9 236 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 CNSTQ6PJW8 725 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 RPS27LQ71UM5 84 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 NPWQ8N729 165 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 FAM47BQ8NA70 645 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TNIP3Q96KP6 325 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SUCOQ9UBS9 1254 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 GMEB1Q9Y692 573 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PRORSD1PA6NEY8 169 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SAC3D1A6NKF1 404 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 H3BNH8 94 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 MRASO14807 208 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SPTLC1O15269 473 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 NCAM2O15394 837 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 MTSS1O43312 755 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 DUSP11O75319 330 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 GPR32O75388 356 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 RPL10P27635 214 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 NDST2P52849 883 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 PITRM1Q5JRX3 1037 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 POTEHQ6S545 545 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TRIM74Q86UV6 250 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TRIM73Q86UV7 250 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 CLVS1Q8IUQ0 354 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SPNS2Q8IVW8 549 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF786Q8N393 782 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 TXNDC5Q8NBS9 432 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 IPMKQ8NFU5 416 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SPATA22Q8NHS9 363 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 DIS3LQ8TF46 1054 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 UPF3AQ9H1J1 476 aaKnown RBP12.6□□□□□ -0.39
CAPN1-208ENST00000527323 SPAG4Q9NPE6 437 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 DDIT4Q9NX09 232 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 AURKCQ9UQB9 309 aa12.6□□□□□ -0.39
CAPN1-208ENST00000527323 REV3LO60673 3130 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 TET1Q8NFU7 2136 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 PLOD2O00469 737 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 COL6A2P12110 1019 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 NCAM1P13591 858 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 FRG1Q14331 258 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SNX17Q15036 470 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 PPP1R3AQ16821 1122 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 ZNF280DQ6N043 979 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 HEXDCQ8WVB3 486 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 GFM2Q969S9 779 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 PHF21BQ96EK2 531 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 SNX27Q96L92 541 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 DCUN1D5Q9BTE7 237 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 DUSP16Q9BY84 665 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 CLK4Q9HAZ1 481 aaKnown RBP12.59□□□□□ -0.39
CAPN1-208ENST00000527323 IL1RL2Q9HB29 575 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 OLAHQ9NV23 265 aa12.59□□□□□ -0.39
CAPN1-208ENST00000527323 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms