RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CWC15Q9P013 229 aaKnown RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 PPARGC1AQ9UBK2 798 aaKnown RBP11.12□□□□□ -0.63
NEDD8-204ENST00000526430 SLC12A6Q9UHW9 1150 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 OR51B4Q9Y5P0 310 aa11.12□□□□□ -0.63
NEDD8-204ENST00000526430 SRGAP2O75044 1071 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 CCDC175P0C221 793 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 CD70P32970 193 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 NOP2P46087 812 aaKnown RBP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 KIF5AQ12840 1032 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 SMTNL2Q2TAL5 461 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 NAPEPLDQ6IQ20 393 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 C11orf63Q6NUN7 778 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 POLNQ7Z5Q5 900 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 KIAA1328Q86T90 577 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 NT5DC3Q86UY8 548 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 ADIPOR2Q86V24 386 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 CHSY1Q86X52 802 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 PSTKQ8IV42 348 aaKnown RBP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 CCAR2Q8N163 923 aaKnown RBP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 DDI1Q8WTU0 396 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 ANP32BQ92688 251 aaKnown RBP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 KRT35Q92764 455 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 ABCG4Q9H172 646 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 EPN3Q9H201 632 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 LRRC4CQ9HCJ2 640 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 PCDH18Q9HCL0 1135 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 EVA1BQ9NVM1 165 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 SERGEFQ9UGK8 458 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 SUN2Q9UH99 717 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 AP4E1Q9UPM8 1137 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 TBC1D30Q9Y2I9 924 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 MFHAS1Q9Y4C4 1052 aa11.11□□□□□ -0.63
NEDD8-204ENST00000526430 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.11□□□□□ -0.63
NEDD8-204ENST00000526430 MACROD2A1Z1Q3 448 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 WASH4PA8MWX3 477 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 F5H5T6 163 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 RIOK3O14730 519 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DDX3YO15523 660 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 PRPSAP2O60256 369 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 SDC3O75056 442 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 PALMO75781 387 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 LUC7L3O95232 432 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ITGA2BP08514 1039 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DLDP09622 509 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 GIMD1P0DJR0 217 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 GOT1P17174 413 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DGKAP23743 735 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 MZF1P28698 734 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 NUDT1P36639 197 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 SLC1A1P43005 524 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 HCAR3P49019 387 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 MTA1Q13330 715 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DPYSQ14117 519 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 TAZQ16635 292 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 LRRC38Q5VT99 294 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 CHST9Q7L1S5 443 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 TP53INP2Q8IXH6 220 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 APCDD1Q8J025 514 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 RNF10Q8N5U6 811 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 HJURPQ8NCD3 748 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 GANCQ8TET4 914 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 CYB5D2Q8WUJ1 264 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ATXN7L3BQ96GX2 97 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 NCAPGQ9BPX3 1015 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DDX50Q9BQ39 737 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 HERPUD2Q9BSE4 406 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 NEUROG2Q9H2A3 272 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ADNPQ9H2P0 1102 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 DHX35Q9H5Z1 703 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 LUC7LQ9NQ29 371 aaKnown RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 LZTFL1Q9NQ48 299 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ETNK2Q9NVF9 386 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 STIM2Q9P246 746 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 PLEKHB1Q9UF11 243 aaPredicted RBP11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ACSL6Q9UKU0 697 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 GUCA1BQ9UMX6 200 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 SRPK3Q9UPE1 567 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 ENTPD2Q9Y5L3 495 aa11.1□□□□□ -0.63
NEDD8-204ENST00000526430 LY6G6EA0A0G2JKS1 128 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 RNASEH1O60930 286 aaKnown RBP11.09□□□□□ -0.63
NEDD8-204ENST00000526430 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
NEDD8-204ENST00000526430 AMPD1P23109 780 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 KDELR1P24390 212 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 CASRP41180 1078 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PLK1P53350 603 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 CDH4P55283 916 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 DPYSL3Q14195 570 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 CST6Q15828 149 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 ACBD5Q5T8D3 534 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-204ENST00000526430 AFMIDQ63HM1 303 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 AHI1Q8N157 1196 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PQLC3Q8N755 202 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 NETO2Q8NC67 525 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 WDR36Q8NI36 951 aaKnown RBP11.09□□□□□ -0.63
NEDD8-204ENST00000526430 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 KIAA1524Q8TCG1 905 aa11.09□□□□□ -0.63
NEDD8-204ENST00000526430 MAPK15Q8TD08 544 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms