RNA–Protein interactions for RNA: ENST00000525207.1

SF3B2-204, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-204ENST00000525207 ELP6Q0PNE2 266 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 EIF2B5Q13144 721 aaKnown RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 ACAP1Q15027 740 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 IRF4Q15306 451 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 SMTNL2Q2TAL5 461 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 ZNF542PQ5EBM4 170 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 BRAT1Q6PJG6 821 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 MACC1Q6ZN28 852 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 ARHGAP36Q6ZRI8 547 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 TTC7BQ86TV6 843 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 VPS36Q86VN1 386 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 ZSWIM9Q86XI8 627 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 FAM181AQ8N9Y4 354 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 TP53I13Q8NBR0 393 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 HCAR2Q8TDS4 363 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 IQCDQ96DY2 449 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 TBATAQ96M53 351 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 DUSP23Q9BVJ7 150 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 CINPQ9BW66 212 aaPredicted RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 ZWILCHQ9H900 591 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 MRPL47Q9HD33 250 aaKnown RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 CWC15Q9P013 229 aaKnown RBP9.54□□□□□ -0.88
SF3B2-204ENST00000525207 MYO1AQ9UBC5 1043 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 KLF15Q9UIH9 416 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
SF3B2-204ENST00000525207 RP1P56715 2156 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 DSPP15924 2871 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 NEMP2A6NFY4 417 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 H3BRJ5 948 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 K7ESM1 405 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 DFFAO00273 331 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 TOR1BO14657 336 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 DAPK3O43293 454 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 AQP9O43315 295 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 GYPCP04921 128 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 JUPP14923 745 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 JUNDP17535 347 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ITIH2P19823 946 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 XPAP23025 273 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 SERPINA4P29622 427 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CSNK1DP48730 415 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 HCAR3P49019 387 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 THOP1P52888 689 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 UBASH3AP57075 661 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 SLC25A11Q02978 314 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 IL10RBQ08334 325 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CYP4F3Q08477 520 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 RFTN1Q14699 578 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 UGP2Q16851 508 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 TMEM52BQ4KMG9 183 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CFAP58Q5T655 872 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 TMCO4Q5TGY1 634 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ZCCHC8Q6NZY4 707 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 TP53INP2Q8IXH6 220 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 PHACTR4Q8IZ21 702 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 RBFAQ8N0V3 343 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CACTIN-AS1Q8N1I8 211 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 LZTR1Q8N653 840 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 NIPA2Q8N8Q9 360 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 DCBLD1Q8N8Z6 715 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ECHDC3Q96DC8 303 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 APOLD1Q96LR9 279 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ZNF641Q96N77 438 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 WRAP53Q9BUR4 548 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 LRRC61Q9BV99 259 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 THAP2Q9H0W7 228 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 SUV39H2Q9H5I1 410 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ATP13A3Q9H7F0 1226 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 USP29Q9HBJ7 922 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 SCUBE2Q9NQ36 999 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 MBNL1Q9NR56 388 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 APOBEC3BQ9UH17 382 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 IPO11Q9UI26 975 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 PNMA8BQ9ULN7 279 aaPredicted RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 LHX6Q9UPM6 363 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CLCA2Q9UQC9 943 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 ATP8A1Q9Y2Q0 1164 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 COQ6Q9Y2Z9 468 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 BZW2Q9Y6E2 419 aaKnown RBP9.53□□□□□ -0.88
SF3B2-204ENST00000525207 CSNK1G3Q9Y6M4 447 aa9.53□□□□□ -0.88
SF3B2-204ENST00000525207 A0A087X0T9 212 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 MUSKO15146 869 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 LAMA5O15230 3695 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 LZTS3O60299 673 aaPredicted RBP9.52□□□□□ -0.89
SF3B2-204ENST00000525207 BUB1BO60566 1050 aaPredicted RBP9.52□□□□□ -0.89
SF3B2-204ENST00000525207 PALMO75781 387 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 SERPING1P05155 500 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 GP1BAP07359 652 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 FAM228BP0C875 321 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 ARL4AP40617 200 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 AP1S1P61966 158 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 YPEL5P62699 121 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 ZBED6P86452 979 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 E2F1Q01094 437 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 RALGDSQ12967 914 aa9.52□□□□□ -0.89
SF3B2-204ENST00000525207 TARDBPQ13148 414 aaKnown RBP eCLIP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms