RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 TEX26Q8N6G2 289 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PRELID2Q8N945 189 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SUMF1Q8NBK3 374 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 IPMKQ8NFU5 416 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC35B2Q8TB61 432 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CASKIN2Q8WXE0 1202 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 OXNAD1Q96HP4 312 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 TEKT5Q96M29 485 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC6A18Q96N87 628 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 NAPGQ99747 312 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 MGME1Q9BQP7 344 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 MLPHQ9BV36 600 aaPredicted RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 FICDQ9BVA6 458 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 POLR1EQ9GZS1 481 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 CARD9Q9H257 536 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 SUV39H2Q9H5I1 410 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ATP13A3Q9H7F0 1226 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 USP29Q9HBJ7 922 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 GLOD4Q9HC38 313 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PCDH12Q9NPG4 1184 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 AASDHPPTQ9NRN7 309 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RXFP3Q9NSD7 469 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RSPH14Q9UHP6 348 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF148Q9UQR1 794 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 FNDC3AQ9Y2H6 1198 aaKnown RBP4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ZKSCAN5Q9Y2L8 839 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ATP8A1Q9Y2Q0 1164 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 PCDHGA2Q9Y5H1 932 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 RAI2Q9Y5P3 530 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 FADS3Q9Y5Q0 445 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 ATG2BQ96BY7 2078 aa4.64□□□□□ -1.67
CHMP4A-202ENST00000524955 WDFY4Q6ZS81 3184 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC28Q96AY4 2481 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CCDC163A0A0D9SF12 145 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 BCLAF3A2AJT9 711 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NPIPB15A6NHN6 443 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRC72A6NJI9 287 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 METTL12A8MUP2 240 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 UPK3BL1B0FP48 263 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 HACD1B0YJ81 288 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 UPK3BL2E5RIL1 263 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 AURKAO14965 403 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ALOX15BO15296 676 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 GDF9O60383 454 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 URI1O94763 535 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PGLSO95336 258 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PAK4O96013 591 aaPredicted RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PRLP01236 227 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 IGLV3-19P01714 112 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LMNAP02545 664 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 WNT1P04628 370 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CFIP05156 583 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SERPINF2P08697 491 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 TPH1P17752 444 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LHCGRP22888 699 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ITGB7P26010 798 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 RPL22P35268 128 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 HNF1BP35680 557 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 MPLP40238 635 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NBL1P41271 181 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 GRIA1P42261 906 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 MAPK8P45983 427 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CSNK1DP48730 415 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CSNK1EP49674 416 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LIG3P49916 1009 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NUBP1P53384 320 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 EPHB1P54762 984 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 WNT3AP56704 352 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 AP1S1P61966 158 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ETF1P62495 437 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ZBTB16Q05516 673 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 C2orf54Q08AI8 447 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 NSUN2Q08J23 767 aaKnown RBP eCLIP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 RALGDSQ12967 914 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 XRCC4Q13426 336 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 BYSLQ13895 437 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PTPRCAPQ14761 206 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ACOX1Q15067 660 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SMAD1Q15797 465 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 QPCTQ16769 361 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 UGP2Q16851 508 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF284Q2VY69 593 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF542PQ5EBM4 170 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ARMC12Q5T9G4 340 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PAPD7Q5XG87 772 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LYSMD4Q5XG99 296 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 KDELC1Q6UW63 502 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC36A4Q6YBV0 504 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 USP30Q70CQ3 517 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 BZW1Q7L1Q6 419 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 GSTA5Q7RTV2 222 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 CYP2U1Q7Z449 544 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 METTL3Q86U44 580 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 ALYREFQ86V81 257 aaKnown RBP4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 LRRC49Q8IUZ0 686 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PLPP6Q8IY26 295 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 KIAA2013Q8IYS2 634 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 PELI3Q8N2H9 469 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 RASGEF1CQ8N431 466 aa4.63□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC13Q8NBP0 860 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms