RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 CHRDL2Q6WN34 429 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 FKBP9P1Q75LS8 142 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
BEST1-203ENST00000524877 COPS8Q99627 209 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 CDC42EP4Q9H3Q1 356 aaKnown RBP17.17■□□□□ 0.34
BEST1-203ENST00000524877 MTO1Q9Y2Z2 717 aaKnown RBP17.17■□□□□ 0.34
BEST1-203ENST00000524877 DNAJC25-GNG10A0A024R161 153 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 DEFA1P59665 94 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 DEFA3P59666 94 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 RGS1Q08116 209 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 OVCA2Q8WZ82 227 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 BAP1Q92560 729 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 CNBD2Q96M20 576 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 RHOBTB2Q9BYZ6 727 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 SHCBP1LQ9BZQ2 653 aa17.17■□□□□ 0.34
BEST1-203ENST00000524877 R3HDM2Q9Y2K5 976 aaKnown RBP17.17■□□□□ 0.34
BEST1-203ENST00000524877 ISM1B1AKI9 464 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 ZSCAN9O15535 394 aaPredicted RBP17.16■□□□□ 0.34
BEST1-203ENST00000524877 LIASO43766 372 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 IDSP22304 550 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 TLX1P31314 330 aaPredicted RBP17.16■□□□□ 0.34
BEST1-203ENST00000524877 FAM151BQ6UXP7 276 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 RBFAQ8N0V3 343 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 EPN3Q9H201 632 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 CLIC5Q9NZA1 410 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 RHPN2P1A8MT19 583 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 BLKP51451 505 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 LINGO4Q6UY18 593 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 C10orf53Q8N6V4 93 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 ARMC7Q9H6L4 198 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 GDAP2Q9NXN4 497 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 SAE1Q9UBE0 346 aaPredicted RBP17.16■□□□□ 0.34
BEST1-203ENST00000524877 TNPO3Q9Y5L0 923 aaKnown RBP17.16■□□□□ 0.34
BEST1-203ENST00000524877 PCP4L1A6NKN8 68 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 GRK2P25098 689 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 L1CAMP32004 1257 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 MC4RP32245 332 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 BBS12Q6ZW61 710 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 MILR1Q7Z6M3 343 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 ZNF614Q8N883 585 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 ADAMTS10Q9H324 1103 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 CARD8Q9Y2G2 431 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 BUD23O43709 281 aaKnown RBP17.16■□□□□ 0.34
BEST1-203ENST00000524877 CHRNA1P02708 482 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 CPA3P15088 417 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 HSD17B3P37058 310 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 CLEC20AQ6ZU45 233 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 LGMNQ99538 433 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 GLOD4Q9HC38 313 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 COL18A1P39060 1754 aa17.16■□□□□ 0.34
BEST1-203ENST00000524877 VIPP01282 170 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ILF3Q12906 894 aaKnown RBP eCLIP17.15■□□□□ 0.34
BEST1-203ENST00000524877 GRM2Q14416 872 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 SNAP47Q5SQN1 464 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 WDR48Q8TAF3 677 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ZNF473Q8WTR7 871 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 CD101Q93033 1021 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 IL12RB2Q99665 862 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ZCWPW1Q9H0M4 648 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 VPS45Q9NRW7 570 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 PNMA8BQ9ULN7 279 aaPredicted RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 RBM47A0AV96 593 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 SLCO1B7G3V0H7 640 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ITGBL1O95965 494 aaPredicted RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 PRKAA2P54646 552 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 DMC1Q14565 340 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 CYB5D1Q6P9G0 228 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 TRIM8Q9BZR9 551 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 FCF1Q9Y324 198 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 COLEC10Q9Y6Z7 277 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 EIF2S1P05198 315 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 ITGAVP06756 1048 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 CAPZA2P47755 286 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 RNF19BQ6ZMZ0 732 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 RTL3Q8N8U3 475 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 SCAMP5Q8TAC9 235 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 KCTD13Q8WZ19 329 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 OTULINQ96BN8 352 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 SCML2Q9UQR0 700 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 GLYATL1P3A0A0U1RQE8 302 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 MTMR11A4FU01 709 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 VNN1O95497 513 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ENO1P06733 434 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 CCNCP24863 283 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 MAGEA11P43364 429 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 CLCN5P51795 746 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 SUZ12Q15022 739 aaKnown RBP17.15■□□□□ 0.34
BEST1-203ENST00000524877 PLA2G4EQ3MJ16 856 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 ALLCQ8N6M5 410 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 WDR60Q8WVS4 1066 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 DACH2Q96NX9 599 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 CSPG4P5Q96PW8 444 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 KXD1Q9BQD3 176 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 DMAC2Q9NW81 257 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 CACNG4Q9UBN1 327 aa17.15■□□□□ 0.34
BEST1-203ENST00000524877 GJA1P17302 382 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms