RNA–Protein interactions for RNA: ENST00000524213.5

CSGALNACT1-216, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-216ENST00000524213 FEM1CQ96JP0 617 aa16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 LGMNQ99538 433 aa16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 GTPBP2Q9BX10 602 aaKnown RBP16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 NT5MQ9NPB1 228 aa16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 PACSIN2Q9UNF0 486 aaPredicted RBP16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 FADS3Q9Y5Q0 445 aa16.77■□□□□ 0.28
CSGALNACT1-216ENST00000524213 TSPAN11A1L157 253 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 GOLGA6L9A6NEM1 432 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 C10orf142B7Z368 130 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 RNF103O00237 685 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ARHGAP33O14559 1287 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MUSKO15146 869 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 BCAT2O15382 392 aaPredicted RBP16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MTSS1O43312 755 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TSPAN6O43657 245 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SOCS5O75159 536 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ZNF189O75820 626 aaPredicted RBP16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 IGHV4-34P06331 123 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PYGMP11217 842 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 NFKBIAP25963 317 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TAS2R38P59533 333 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 POLR2LP62875 67 aaKnown RBP16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 IFI35P80217 286 aaPredicted RBP16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ITKQ08881 620 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ELP6Q0PNE2 266 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 XRCC4Q13426 336 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 LLGL1Q15334 1064 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 UAP1L1Q3KQV9 507 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SEL1L2Q5TEA6 688 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 KIAA1161Q6NSJ0 714 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PGBD5Q8N414 524 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TTC13Q8NBP0 860 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 OR2I1PQ8NGU4 316 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 VOPP1Q96AW1 172 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 IL12RB2Q99665 862 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 FERMT1Q9BQL6 677 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 HEMGNQ9BXL5 484 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 DMTF1Q9Y222 760 aa16.76■□□□□ 0.27
CSGALNACT1-216ENST00000524213 CNOT1A5YKK6 2376 aaKnown RBP16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MED19A0JLT2 244 aaPredicted RBP16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 NEMP1O14524 444 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 RNGTTO60942 597 aaKnown RBP16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PCDH8O95206 1070 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ATXN3P54252 364 aaPredicted RBP16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MAXP61244 160 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 GRIK2Q13002 908 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 RPS6KA1Q15418 735 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PPM1JQ5JR12 505 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MEI1Q5TIA1 1274 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ALG1LQ6GMV1 187 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 HORMAD1Q86X24 394 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 CAMK1DQ8IU85 385 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MINDY1Q8N5J2 469 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ORAI3Q9BRQ5 295 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 KCNF1Q9H3M0 494 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ATP8A1Q9Y2Q0 1164 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SPTBN2O15020 2390 aa16.75■□□□□ 0.27
CSGALNACT1-216ENST00000524213 UPK3BL1B0FP48 263 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 UPK3BL2E5RIL1 263 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 LATO43561 262 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 JCHAINP01591 159 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SYPP08247 313 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TIMP2P16035 220 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PECAM1P16284 738 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 CA4P22748 312 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ABL2P42684 1182 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 RPS21P63220 83 aaKnown RBP16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ADCY2Q08462 1091 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ZNF211Q13398 564 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PRKD1Q15139 912 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 NOMO1Q15155 1222 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TEAD4Q15561 434 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SETMARQ53H47 684 aaPredicted RBP16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SLC45A4Q5BKX6 768 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ERAP2Q6P179 960 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SKA1Q96BD8 255 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ECHDC3Q96DC8 303 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 VAT1Q99536 393 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 SEMA3CQ99985 751 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 EBF2Q9HAK2 575 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 NOD2Q9HC29 1040 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TM9SF3Q9HD45 589 aa16.74■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ANKRD36A6QL64 1941 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 A0A1W2PQU0 124 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 KCNK1O00180 336 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TRAFD1O14545 582 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 HTRA2O43464 458 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 HLA-DQB2P05538 268 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 KCNA4P22459 653 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 MSNP26038 577 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PPP2CBP62714 309 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 RACK1P63244 317 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 PPP2CAP67775 309 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 BNC1Q01954 994 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 UGP2Q16851 508 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 TEX44Q53QW1 395 aa16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 ZC3H18Q86VM9 953 aaKnown RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 CDKL3Q8IVW4 592 aaPredicted RBP16.73■□□□□ 0.27
CSGALNACT1-216ENST00000524213 NDUFAF2Q8N183 169 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms