RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	LRRC8B	Q6P9F7	803 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	EPGN	Q6UW88	154 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TAS1R1	Q7RTX1	841 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	CLEC14A	Q86T13	490 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM110	Q86TL2	294 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	RASSF3	Q86WH2	238 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TTC30A	Q86WT1	665 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	HACE1	Q8IYU2	909 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	POU5F2	Q8N7G0	328 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	UBA3	Q8TBC4	463 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC22A17	Q8WUG5	538 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PYDC1	Q8WXC3	89 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	CNDP1	Q96KN2	507 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRICKLE1	Q96MT3	831 aa	Predicted RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	SPATA13	Q96N96	652 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	RILP	Q96NA2	401 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMEM175	Q9BSA9	504 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MCMBP	Q9BTE3	642 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	APOL6	Q9BWW8	343 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	VN1R3	Q9BXE9	311 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	EIF2A	Q9BY44	585 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	CDH19	Q9H159	772 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ASB7	Q9H672	318 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	ZNF696	Q9H7X3	374 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MRPL17	Q9NRX2	175 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PNPO	Q9NVS9	261 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PTTG2	Q9NZH5	202 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	C6orf203	Q9P0P8	240 aa	Predicted RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC17A6	Q9P2U8	582 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	COPG2	Q9UBF2	871 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	EGFL7	Q9UHF1	273 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	DCDC2	Q9UHG0	476 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	RIMS3	Q9UJD0	308 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TSPAN16	Q9UKR8	245 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMCO1	Q9UM00	188 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRPF19	Q9UMS4	504 aa	Known RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	PSMD13	Q9UNM6	376 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	HES2	Q9Y543	173 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	IPP	Q9Y573	584 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	MAD1L1	Q9Y6D9	718 aa		7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	7.93	□□□□□ -1.14
SPIDR-223	ENST00000524033	C15orf38-AP3S2	A0A0A6YYH1	394 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033		A0A1B0GVG6	124 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PRSS51	A0A1B0GVH4	220 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	WDR27	A2RRH5	827 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC22A2	O15244	555 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PAPSS1	O43252	624 aa	Predicted RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PDE5A	O76074	875 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SORBS2	O94875	1100 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	BAG2	O95816	211 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ITGB3	P05106	788 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ITGA2B	P08514	1039 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	CNP	P09543	421 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SPATA31D3	P0C874	917 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARF4	P18085	180 aa	Predicted RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	AKAP5	P24588	427 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	GP5	P40197	560 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	CHN2	P52757	468 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	HK2	P52789	917 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC6A3	Q01959	620 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	NHLH1	Q02575	133 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	GBE1	Q04446	702 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SIGLEC14	Q08ET2	396 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	NSUN2	Q08J23	767 aa	Known RBP eCLIP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	DLG1	Q12959	904 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	MED21	Q13503	144 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	FAM182A	Q5T1J6	154 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	METTL21C	Q5VZV1	264 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARHGAP17	Q68EM7	881 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC27A1	Q6PCB7	646 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	TMC5	Q6UXY8	1006 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SPATA31D4	Q6ZUB0	917 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	FRMD7	Q6ZUT3	714 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC26A9	Q7LBE3	791 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	BNIPL	Q7Z465	357 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	ARPIN	Q7Z6K5	226 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	C10orf107	Q8IVU9	208 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	KLHDC8B	Q8IXV7	354 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	COLGALT2	Q8IYK4	626 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	UBALD2	Q8IYN6	164 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	UNC5B	Q8IZJ1	945 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PQLC1	Q8N2U9	271 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	PGBD3	Q8N328	593 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	FBXW8	Q8N3Y1	598 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	FBXL6	Q8N531	539 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	CPSF7	Q8N684	471 aa	Known RBP	7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	KREMEN2	Q8NCW0	462 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	MAPK15	Q8TD08	544 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	CMTM5	Q96DZ9	223 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	DCUN1D1	Q96GG9	259 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	KLHL5	Q96PQ7	755 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	CSPG4P5	Q96PW8	444 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	KCNK16	Q96T55	309 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	GAD1	Q99259	594 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	NDN	Q99608	321 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	TCHP	Q9BT92	498 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	COLEC11	Q9BWP8	271 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SLC2A11	Q9BYW1	496 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	SAP130	Q9H0E3	1048 aa		7.92	□□□□□ -1.14
SPIDR-223	ENST00000524033	POMK	Q9H5K3	350 aa		7.92	□□□□□ -1.14

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms