RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 TCAF2A6NFQ2 919 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 A6NNZ2 444 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 B8ZZF3 427 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 TULP2O00295 520 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 ALOX15BO15296 676 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SLC16A3O15427 465 aaKnown RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 MED7O43513 233 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 PLRG1O43660 514 aaKnown RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 RTN2O75298 545 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 CBX7O95931 251 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 F13A1P00488 732 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 GP1BAP07359 652 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 PAEPP09466 180 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 ZSCAN22P10073 491 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SLC2A3P11169 496 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 PFKFB1P16118 471 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 TACR2P21452 398 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 HNRNPA2B1P22626 353 aaKnown RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SLC6A4P31645 630 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 ACADSBP45954 432 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 NUMBP49757 651 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 STK19P49842 368 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 KRT83P78385 493 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 LRMPQ12912 555 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 MTA1Q13330 715 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 LY6DQ14210 128 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 EDRF1Q3B7T1 1238 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 CCDC40Q4G0X9 1142 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 FAM133BQ5BKY9 247 aaKnown RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 MS4A13Q5J8X5 152 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 TMEM270Q6UE05 265 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 MMS22LQ6ZRQ5 1243 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 TRIM69Q86WT6 500 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 CFAP52Q8N1V2 620 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SCML4Q8N228 414 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 GUF1Q8N442 669 aaKnown RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 AADATQ8N5Z0 425 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 WDR48Q8TAF3 677 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 IFI44Q8TCB0 444 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 KCTD13Q8WZ19 329 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 ERCC4Q92889 916 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 AZIN2Q96A70 460 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 P2RY11Q96G91 374 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 VCPIP1Q96JH7 1222 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 HSFY1Q96LI6 401 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 SPATA32Q96LK8 384 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 RPRD1AQ96P16 312 aaPredicted RBP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 DIRC2Q96SL1 478 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 IL12RB2Q99665 862 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.39□□□□□ -1.39
PABPC1-220ENST00000522658 OSBPL2Q9H1P3 480 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 RMND1Q9NWS8 449 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 NLGN3Q9NZ94 848 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 COX16Q9P0S2 106 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 VPS28Q9UK41 221 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 PCDHB1Q9Y5F3 818 aa6.39□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 A0A1B0GVL5 298 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CPED1A4D0V7 1026 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 O00370 1275 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 NEMP1O14524 444 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 SLC31A1O15431 190 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 LATO43561 262 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 KLRC4O43908 158 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 OPA1O60313 960 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 RHOBTB3O94955 611 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CENPBP07199 599 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CKMT1AP12532 417 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 KRT5P13647 590 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 PRLRP16471 622 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 DGKAP23743 735 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CCR1P32246 355 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 LSSP48449 732 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 RPS26P62854 115 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 KRT85P78386 507 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CDK17Q00537 523 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 NFATC3Q12968 1075 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 ZNF177Q13360 481 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 SPIDRQ14159 915 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 KCNJ12Q14500 433 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 SHBQ15464 509 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 NR0B2Q15466 257 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 DCAF6Q58WW2 860 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 RALGPS1Q5JS13 557 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 C1orf220Q5T0J3 134 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 ZCCHC8Q6NZY4 707 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 LCLAT1Q6UWP7 414 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 RBM44Q6ZP01 1051 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CDH24Q86UP0 819 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 TAC4Q86UU9 113 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 CIR1Q86X95 450 aaPredicted RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 JAMLQ86YT9 394 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 DCP2Q8IU60 420 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 MRPL41Q8IXM3 137 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 ZC3H3Q8IXZ2 948 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 ATP11CQ8NB49 1132 aa6.38□□□□□ -1.39
PABPC1-220ENST00000522658 DQX1Q8TE96 717 aaKnown RBP6.38□□□□□ -1.39
PABPC1-220ENST00000522658 SEMA4DQ92854 862 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms