RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 SMIM14Q96QK8 99 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 TUBGCP5Q96RT8 1024 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 HERPUD2Q9BSE4 406 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 SLC17A9Q9BYT1 436 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 CEP41Q9BYV8 373 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 SAE1Q9UBE0 346 aaPredicted RBP18.02■□□□□ 0.48
CLK4-211ENST00000522556 PCDHGC4Q9Y5F7 938 aa18.02■□□□□ 0.48
CLK4-211ENST00000522556 CABIN1Q9Y6J0 2220 aa18.02■□□□□ 0.47
CLK4-211ENST00000522556 SPAARA0A1B0GVQ0 90 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 GRID2IPA4D2P6 1211 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 PRAMEF26H0Y7S4 382 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 KCNK1O00180 336 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 TLR4O00206 839 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 NEMP1O14524 444 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 PSTPIP1O43586 416 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 HLA-DQB2P05538 268 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 PECAM1P16284 738 aaPredicted RBP18.01■□□□□ 0.47
CLK4-211ENST00000522556 RPS21P63220 83 aaKnown RBP18.01■□□□□ 0.47
CLK4-211ENST00000522556 DSC2Q02487 901 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 NSUN2Q08J23 767 aaKnown RBP eCLIP18.01■□□□□ 0.47
CLK4-211ENST00000522556 CCDC15Q0P6D6 951 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 ZBTB17Q13105 803 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 TAZQ16635 292 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 UGP2Q16851 508 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 MARC1Q5VT66 337 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 SPOCD1Q6ZMY3 1216 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 ERMP1Q7Z2K6 904 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 DAAM2Q86T65 1068 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 GATAD2AQ86YP4 633 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 MFSD2AQ8NA29 543 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 HDAC11Q96DB2 347 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 FEM1CQ96JP0 617 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 BMFQ96LC9 184 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 OLFM3Q96PB7 478 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 NUDCD1Q96RS6 583 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 C1QTNF2Q9BXJ5 285 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 ATP13A3Q9H7F0 1226 aa18.01■□□□□ 0.47
CLK4-211ENST00000522556 A0A0U1RQS6 177 aa18■□□□□ 0.47
CLK4-211ENST00000522556 PCNX2A6NKB5 2137 aa18■□□□□ 0.47
CLK4-211ENST00000522556 A8MX80 341 aa18■□□□□ 0.47
CLK4-211ENST00000522556 ZNF487B1APH4 448 aa18■□□□□ 0.47
CLK4-211ENST00000522556 APOL1O14791 398 aa18■□□□□ 0.47
CLK4-211ENST00000522556 PJA2O43164 708 aa18■□□□□ 0.47
CLK4-211ENST00000522556 TSPAN6O43657 245 aa18■□□□□ 0.47
CLK4-211ENST00000522556 SERPINA4P29622 427 aa18■□□□□ 0.47
CLK4-211ENST00000522556 IGFALSP35858 605 aa18■□□□□ 0.47
CLK4-211ENST00000522556 MMP12P39900 470 aa18■□□□□ 0.47
CLK4-211ENST00000522556 AP1S1P61966 158 aa18■□□□□ 0.47
CLK4-211ENST00000522556 BCL2L1Q07817 233 aa18■□□□□ 0.47
CLK4-211ENST00000522556 STAT4Q14765 748 aa18■□□□□ 0.47
CLK4-211ENST00000522556 IFI16Q16666 785 aaKnown RBP18■□□□□ 0.47
CLK4-211ENST00000522556 N4BP2L1Q5TBK1 243 aaPredicted RBP18■□□□□ 0.47
CLK4-211ENST00000522556 KAZNQ674X7 775 aa18■□□□□ 0.47
CLK4-211ENST00000522556 IL27RAQ6UWB1 636 aa18■□□□□ 0.47
CLK4-211ENST00000522556 KIAA1328Q86T90 577 aa18■□□□□ 0.47
CLK4-211ENST00000522556 NAXDQ8IW45 347 aa18■□□□□ 0.47
CLK4-211ENST00000522556 LRRC57Q8N9N7 239 aa18■□□□□ 0.47
CLK4-211ENST00000522556 TRAF3IP1Q8TDR0 691 aaPredicted RBP18■□□□□ 0.47
CLK4-211ENST00000522556 ZNF641Q96N77 438 aaPredicted RBP18■□□□□ 0.47
CLK4-211ENST00000522556 TSGA13Q96PP4 275 aa18■□□□□ 0.47
CLK4-211ENST00000522556 SEMA3CQ99985 751 aa18■□□□□ 0.47
CLK4-211ENST00000522556 SCUBE2Q9NQ36 999 aa18■□□□□ 0.47
CLK4-211ENST00000522556 DDX56Q9NY93 547 aaKnown RBP18■□□□□ 0.47
CLK4-211ENST00000522556 TPX2Q9ULW0 747 aaKnown RBP18■□□□□ 0.47
CLK4-211ENST00000522556 ATP8A1Q9Y2Q0 1164 aa18■□□□□ 0.47
CLK4-211ENST00000522556 TDRD6O60522 2096 aaKnown RBP18■□□□□ 0.47
CLK4-211ENST00000522556 A0A1B0GTQ1 180 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 MACROD2A1Z1Q3 448 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 GOLGA8CPA6NN73 597 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 RIOK3O14730 519 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 MATN3O15232 486 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 IPO7O95373 1038 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 THEGLP0DJG4 465 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 CSRP1P21291 193 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 XPAP23025 273 aaPredicted RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 AKT2P31751 481 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 CCT8P50990 548 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 RENBPP51606 427 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 PPIDQ08752 370 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 NIPAL4Q0D2K0 466 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 TMEM52BQ4KMG9 183 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 CFAP58Q5T655 872 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 AADACL2Q6P093 401 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 BRAT1Q6PJG6 821 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 NYAP1Q6ZVC0 841 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 PTAR1Q7Z6K3 402 aaPredicted RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 ABI3BPQ7Z7G0 1075 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 VSIG1Q86XK7 387 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 CCDC13Q8IYE1 715 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 KATNAL2Q8IYT4 538 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 CCNYQ8ND76 341 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 PDCD6IPQ8WUM4 868 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 HAUS1Q96CS2 278 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 ELF4Q99607 663 aaPredicted RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 LUC7LQ9NQ29 371 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 MBNL1Q9NR56 388 aaKnown RBP17.99■□□□□ 0.47
CLK4-211ENST00000522556 RBM22Q9NW64 420 aaKnown RBP eCLIP17.99■□□□□ 0.47
CLK4-211ENST00000522556 TTLL3Q9Y4R7 772 aa17.99■□□□□ 0.47
CLK4-211ENST00000522556 NCOR2Q9Y618 2525 aa17.98■□□□□ 0.47
CLK4-211ENST00000522556 hCG_1818297A0A087WSY0 165 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms