RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 LEFTY1O75610 366 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 IL1BP01584 269 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 DRD1P21728 446 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SEC24CP53992 1094 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SNRPD1P62314 119 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 CALCOCO2Q13137 446 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 RFTN1Q14699 578 aaPredicted RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 PARP6Q2NL67 630 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 ITPRIPL1Q6GPH6 555 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 EIF1ADQ8N9N8 165 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SEC14L1Q92503 715 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 SNF8Q96H20 258 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TMEM245Q9H330 911 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 WNT16Q9UBV4 365 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 TPX2Q9ULW0 747 aaKnown RBP12.5□□□□□ -0.41
PABPC1-219ENST00000522387 PCDHB9Q9Y5E1 797 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
PABPC1-219ENST00000522387 FAM187AA6NFU0 413 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TIMM44O43615 452 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ATP9BO43861 1147 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 IGSF6O95976 241 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ASLP04424 464 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SERPINF2P08697 491 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 CR2P20023 1033 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 HPDP32754 393 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 CARD16Q5EG05 197 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TMC3Q7Z5M5 1100 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 CNPY4Q8N129 248 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 DNAAF3Q8N9W5 541 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 LRRC45Q96CN5 670 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 IMP4Q96G21 291 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 CCT8L2Q96SF2 557 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 FICDQ9BVA6 458 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SLC25A51Q9H1U9 297 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 MFSD1Q9H3U5 465 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TBC1D17Q9HA65 648 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ZDHHC18Q9NUE0 388 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 BCCIPQ9P287 314 aaKnown RBP eCLIP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ANAPC5Q9UJX4 755 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TECTAO75443 2155 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 KANSL1LA0AUZ9 987 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 KPNA3O00505 521 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SYNCRIPO60506 623 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SRPRAP08240 638 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 MYZAPP0CAP1 466 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 HOXB2P14652 356 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ITIH2P19823 946 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SLC8A1P32418 973 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TNFRSF4P43489 277 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 PXNP49023 591 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 WNT3AP56704 352 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 SESN2P58004 480 aaPredicted RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 PRPSAP1Q14558 356 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 NUMA1Q14980 2115 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 MYLK3Q32MK0 819 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 HNRNPA1L2Q32P51 320 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 C9orf64Q5T6V5 341 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 RNASEH2BQ5TBB1 312 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 ZDHHC24Q6UX98 284 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 OR52K1Q8NGK4 314 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 RMDN1Q96DB5 314 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 FCRL5Q96RD9 977 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 TRIM56Q9BRZ2 755 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 MKRN2Q9H000 416 aaKnown RBP12.49□□□□□ -0.41
PABPC1-219ENST00000522387 GRHL1Q9NZI5 618 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 STARD13Q9Y3M8 1113 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 RAI2Q9Y5P3 530 aa12.49□□□□□ -0.41
PABPC1-219ENST00000522387 DNALI1O14645 258 aaPredicted RBP12.48□□□□□ -0.41
PABPC1-219ENST00000522387 CHRNB1P11230 501 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 HNRNPLP14866 589 aaKnown RBP eCLIP12.48□□□□□ -0.41
PABPC1-219ENST00000522387 CTPS1P17812 591 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 COL9A1P20849 921 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 BCL2L1Q07817 233 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 TRAF2Q12933 501 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 GAS6Q14393 721 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 CCDC38Q502W7 563 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 TMEM31Q5JXX7 168 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 TMEM92Q6UXU6 159 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 TRIM67Q6ZTA4 783 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 ARFGAP2Q8N6H7 521 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 PCDH20Q8N6Y1 951 aaKnown RBP12.48□□□□□ -0.41
PABPC1-219ENST00000522387 LPCAT1Q8NF37 534 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 IFT43Q96FT9 208 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 KLHL32Q96NJ5 620 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 NUDCD1Q96RS6 583 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 LTB4R2Q9NPC1 389 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 PRSS16Q9NQE7 514 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 FAM114A2Q9NRY5 505 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 NFS1Q9Y697 457 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 H0YHG0 523 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 MAN2B1O00754 1011 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 PI15O43692 258 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 FSBPO95073 299 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 SHBGP04278 402 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 NTSR1P30989 418 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
PABPC1-219ENST00000522387 NCEH1Q6PIU2 408 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms