RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 ZNF711Q9Y462 761 aa3.6□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIR2DS5A0A0G2JLQ3 304 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMEM191CA6NGB0 347 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 LRRC53A6NM62 1247 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 SMIM22K7EJ46 135 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIR2DS3K7RE56 304 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 HSPB6O14558 160 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TBX10O75333 385 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMCC1O94876 653 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 IL1AP01583 271 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLC2A4P14672 509 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 GCH1P30793 250 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 PPARGP37231 505 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 F2RL1P55085 397 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 INHBCP55103 352 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 YWHAZP63104 245 aaKnown RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 PRAMEP78395 509 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZBED6P86452 979 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 CDC16Q13042 620 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 HIST2H2ACQ16777 129 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 EDRF1Q3B7T1 1238 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 CDONQ4KMG0 1287 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 SPECC1Q5M775 1068 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 PIK3CD-AS1Q5SR53 167 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 FCRLBQ6BAA4 426 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 NAA16Q6N069 864 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 LRRC8EQ6NSJ5 796 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLC30A6Q6NXT4 461 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMCO3Q6UWJ1 677 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF782Q6ZMW2 699 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 SERPINA11Q86U17 422 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TICAM1Q8IUC6 712 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIAA2013Q8IYS2 634 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 CMASQ8NFW8 434 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 KAT2BQ92831 832 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 RADILQ96JH8 1075 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 MSTO1Q9BUK6 570 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 DUSP26Q9BV47 211 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 NDST4Q9H3R1 872 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 ACTR5Q9H9F9 607 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIF9Q9HAQ2 790 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TLK1Q9UKI8 766 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 UTS2RQ9UKP6 389 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 MAFFQ9ULX9 164 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 WNT6Q9Y6F9 365 aa3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 ARHGEF17Q96PE2 2063 aaPredicted RBP3.59□□□□□ -1.83
HMGN1P28-201ENST00000521340 TLX3O43711 291 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 CNOT3O75175 753 aaKnown RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 NFATC1O95644 943 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 IGLV2-14P01704 120 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 FGF2P09038 288 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TRIM21P19474 475 aaKnown RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 GPD1P21695 349 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 YWHAQP27348 245 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 DCTDP32321 178 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TNFSF8P32971 234 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 PTGER1P34995 402 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC16A2P36021 539 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 CLCN3P51790 818 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 CLCNKBP51801 687 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 GALNT3Q14435 633 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 KYNUQ16719 465 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 KRT24Q2M2I5 525 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SOWAHAQ2M3V2 549 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 C2orf68Q2NKX9 166 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 PLEKHO1Q53GL0 409 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 ENTPD8Q5MY95 495 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 MFSD4BQ5TF39 518 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 ANKRD54Q6NXT1 300 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMEM71Q6P5X7 295 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 FBXO46Q6PJ61 603 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TSSK4Q6SA08 328 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TBC1D26Q86UD7 250 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 CCDC25Q86WR0 208 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TDRPQ86YL5 185 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 TMC8Q8IU68 726 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 DDIASQ8IXT1 998 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC35F3Q8IY50 421 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 FAM9BQ8IZU0 186 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 RBFAQ8N0V3 343 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 C17orf53Q8N3J3 647 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 POC5Q8NA72 575 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 KCTD6Q8NC69 237 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 Q8NFD4 153 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 ATOH1Q92858 354 aaPredicted RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 EME1Q96AY2 570 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 ARHGEF26Q96DR7 871 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SLC41A2Q96JW4 573 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 CEP295NLQ96MC4 621 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 ABHD1Q96SE0 405 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 AGAP2Q99490 1192 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SYT17Q9BSW7 474 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 IFT27Q9BW83 186 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 AP1M1Q9BXS5 423 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 OR10A4Q9H209 315 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 PNRC2Q9NPJ4 139 aaKnown RBP3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SH3GLB2Q9NR46 395 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 DLGAP2Q9P1A6 1054 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 SEL1LQ9UBV2 794 aa3.58□□□□□ -1.84
HMGN1P28-201ENST00000521340 NDRG3Q9UGV2 375 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms